RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 HOXC9P31274 260 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 MTHFSP49914 203 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 IDH3AP50213 366 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 UNC5CLQ8IV45 518 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 COL26A1Q96A83 441 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 CFAP53Q96M91 514 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 C8orf37Q96NL8 207 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 OXCT2Q9BYC2 517 aaPredicted RBP7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 GGA1Q9UJY5 639 aa7.33□□□□□ -1.24
HMGB1P44-201ENST00000508597 FAM208AQ9UK61 1670 aaKnown RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 NEURL1BA8MQ27 555 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 TNNT2P45379 298 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 EVA1CP58658 441 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 RRS1Q15050 365 aaKnown RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 FAM182BQ5T319 152 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 DIEXFQ68CQ4 756 aaKnown RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 TREML1Q86YW5 311 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 SVOPQ8N4V2 548 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 BTG4Q9NY30 223 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 USP21Q9UK80 565 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 TRPC5Q9UL62 973 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 KCNH4Q9UQ05 1017 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 DNMT3AQ9Y6K1 912 aaPredicted RBP7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 PLCH1Q4KWH8 1693 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 CAMTA1Q9Y6Y1 1673 aa7.32□□□□□ -1.24
HMGB1P44-201ENST00000508597 AFF2P51816 1311 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 WDR17Q8IZU2 1322 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 COL5A2P05997 1499 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 MAP2K3P46734 347 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 KCNQ4P56696 695 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 SPEM2Q0P670 501 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 CHRNA2Q15822 529 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 VPS72Q15906 364 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 IER5Q5VY09 327 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 FCHSD1Q86WN1 690 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 GTF3C2Q8WUA4 911 aaPredicted RBP7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 ANO2Q9NQ90 1003 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 ADAMTS8Q9UP79 889 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 THRAP3Q9Y2W1 955 aaKnown RBP7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 PLEKHG2Q9H7P9 1386 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 RGPD5Q99666 1765 aa7.31□□□□□ -1.24
HMGB1P44-201ENST00000508597 BCL9LQ86UU0 1499 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 NRAPQ86VF7 1730 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 CRB1P82279 1406 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 PPM1GO15355 546 aaPredicted RBP7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 OIP5O43482 229 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 DIAPH1O60610 1272 aaKnown RBP7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 PTCD1O75127 700 aaKnown RBP7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 BCRP11274 1271 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 FBLN1P23142 703 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 LAMC2Q13753 1193 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 SYT9Q86SS6 491 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 ATCAYQ86WG3 371 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 GALNT6Q8NCL4 622 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 ANKRD24Q8TF21 1146 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 CARD10Q9BWT7 1032 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 GSX2Q9BZM3 304 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 PEAK1Q9H792 1746 aa7.3□□□□□ -1.24
HMGB1P44-201ENST00000508597 ATRNO75882 1429 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 HOXB4P17483 251 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 IL13P35225 146 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 ZNF468Q5VIY5 522 aaPredicted RBP7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 TOM1L2Q6ZVM7 507 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 RGL4Q8IZJ4 473 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 PNNQ9H307 717 aaKnown RBP7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 PRR12Q9ULL5 1215 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 IVNS1ABPQ9Y6Y0 642 aa7.29□□□□□ -1.24
HMGB1P44-201ENST00000508597 SPATA31A5Q5VU36 1347 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 SPATA31A7Q8IWB4 1347 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 CCER2I3L3R5 266 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 ARAFP10398 606 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 RBM6P78332 1123 aaKnown RBP7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 CNGB1Q14028 1251 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 EIF4A2Q14240 407 aaKnown RBP7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 TCP11L2Q8N4U5 519 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 EDARADDQ8WWZ3 215 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 BHMTQ93088 406 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 MDFIQ99750 246 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 ZFATQ9P243 1243 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 STIM2Q9P246 746 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 STK17AQ9UEE5 414 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 NSFL1CQ9UNZ2 370 aaKnown RBP7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 RTCBQ9Y3I0 505 aaKnown RBP7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 KCNMB2Q9Y691 235 aa7.28□□□□□ -1.24
HMGB1P44-201ENST00000508597 SPATA31A1Q5TZJ5 1347 aa7.27□□□□□ -1.24
HMGB1P44-201ENST00000508597 NCAPD2Q15021 1401 aa7.27□□□□□ -1.24
HMGB1P44-201ENST00000508597 BRD2P25440 801 aaKnown RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 TARSP26639 723 aaKnown RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 ARID4AP29374 1257 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 SERPINB4P48594 390 aa7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 SNRPNP63162 240 aaKnown RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 ZNF211Q13398 564 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 TRIP4Q15650 581 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 KRT25Q7Z3Z0 450 aa7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 CMTR1Q8N1G2 835 aaKnown RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 GZF1Q9H116 711 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P44-201ENST00000508597 NLRP2Q9NX02 1062 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms