RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 PEX19P40855 299 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 USP5P45974 858 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 IRX5P78411 483 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 SEL1L2Q5TEA6 688 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC62Q6P9F0 684 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC144CPQ8IYA2 1237 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 TRIM58Q8NG06 486 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RABEP2Q9H5N1 569 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 KIAA1468Q9P260 1216 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 NFE2L3Q9Y4A8 694 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 KIF14Q15058 1648 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 SMIM24O75264 130 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CALM1P0DP23 149 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CALM2P0DP24 149 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CALM3P0DP25 149 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CALML3P27482 149 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RBM6P78332 1123 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 IFIT5Q13325 482 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 ADALQ6DHV7 355 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 C8orf58Q8NAV2 365 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CCHCR1Q8TD31 782 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 FERMT1Q9BQL6 677 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 HAUS4Q9H6D7 363 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 PPANQ9NQ55 473 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RTL9Q8NET4 1388 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 CHUKO15111 745 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 KRT9P35527 623 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 KRT2P35908 639 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 RAD51AP2Q09MP3 1159 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 TBC1D8BQ0IIM8 1120 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 FBXO38Q6PIJ6 1188 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 TXNDC2Q86VQ3 553 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 N4BP2L2Q92802 583 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 ARHGEF2Q92974 986 aaKnown RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 MKNK2Q9HBH9 465 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 SPINK5Q9NQ38 1064 aaPredicted RBP8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 PTPRKQ15262 1439 aa8.19□□□□□ -1.1
UBE2D3-224ENST00000508474 PI4KAP2A4QPH2 592 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 ATP2B2Q01814 1243 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 ZBTB17Q13105 803 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 PPP2R5EQ16537 467 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 NBPF14Q5TI25 921 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 SEPT14Q6ZU15 432 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 PI4KAP1Q8N8J0 262 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 RAB3IL1Q8TBN0 382 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 SYTL4Q96C24 671 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 PARP2Q9UGN5 583 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 FAN1Q9Y2M0 1017 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 SLC27A2O14975 620 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 UQCRFS1P1P0C7P4 283 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 CCT6AP40227 531 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 GNAQP50148 359 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 DBN1Q16643 649 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 STAG1Q8WVM7 1258 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 JPH2Q9BR39 696 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 NUCKS1Q9H1E3 243 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 FAM114A2Q9NRY5 505 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 UGGT2Q9NYU1 1516 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 KRT71Q3SY84 523 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 LRRC23Q53EV4 343 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 CDC37L1Q7L3B6 337 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC63Q8NA47 563 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 ERMNQ8TAM6 284 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 TESK2Q96S53 571 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 NCAPGQ9BPX3 1015 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 HOMER3Q9NSC5 361 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 KLHL14Q9P2G3 628 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 CTNND2Q9UQB3 1225 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 SEC31AO94979 1220 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 ZFYVE9O95405 1425 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 TCP1P17987 556 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 SAMD1Q6SPF0 538 aaPredicted RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 USP37Q86T82 979 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 ZBTB9Q96C00 473 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 DDX27Q96GQ7 796 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 NOC4LQ9BVI4 516 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 RAB17Q9H0T7 212 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 HELLSQ9NRZ9 838 aa8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 TCOF1Q13428 1488 aaKnown RBP8.18□□□□□ -1.1
UBE2D3-224ENST00000508474 FAM135BQ49AJ0 1406 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 NDC80O14777 642 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 TBCAO75347 108 aaKnown RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 PAK1Q13153 545 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 HSP90AA5PQ58FG0 334 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 ZNF444Q8N0Y2 327 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CSRNP2Q9H175 543 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 HYOU1Q9Y4L1 999 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 PDE4BQ07343 736 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 E2F4Q16254 413 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 SPTY2D1Q68D10 685 aaPredicted RBP8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 GSTA5Q7RTV2 222 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 CCDC25Q86WR0 208 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 SYCE1Q8N0S2 351 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 VPS52Q8N1B4 723 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 TRIML1Q8N9V2 468 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 KCNH5Q8NCM2 988 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 ESR2Q92731 530 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 VPS16Q9H269 839 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 KAT14Q9H8E8 782 aa8.17□□□□□ -1.1
UBE2D3-224ENST00000508474 C14orf93Q9H972 538 aaKnown RBP8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms