RNA–Protein interactions for RNA: ENST00000506820.1

AFP-203, Transcript of alpha fetoprotein, humanhuman

TSL 2

Gene AFP, Length 476 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-203ENST00000506820 FCGRTP55899 365 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 GRM2Q14416 872 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 TMC7Q7Z402 723 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 DTX1Q86Y01 620 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 EPS8L3Q8TE67 593 aaKnown RBP6.12□□□□□ -1.43
AFP-203ENST00000506820 EZH1Q92800 747 aaPredicted RBP6.12□□□□□ -1.43
AFP-203ENST00000506820 NRSN2Q9GZP1 204 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 ABCB6Q9NP58 842 aa6.12□□□□□ -1.43
AFP-203ENST00000506820 GPN3Q9UHW5 284 aaPredicted RBP6.12□□□□□ -1.43
AFP-203ENST00000506820 CYP26A1O43174 497 aa6.11□□□□□ -1.43
AFP-203ENST00000506820 PIDD1Q9HB75 910 aa6.11□□□□□ -1.43
AFP-203ENST00000506820 TMEM39AQ9NV64 488 aa6.11□□□□□ -1.43
AFP-203ENST00000506820 SAMM50Q9Y512 469 aa6.11□□□□□ -1.43
AFP-203ENST00000506820 ACTL7BQ9Y614 415 aa6.11□□□□□ -1.43
AFP-203ENST00000506820 PAX4O43316 350 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 MED26O95402 600 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 F13BP05160 661 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 NFICP08651 508 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 FOSL1P15407 271 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 ZNF157P51786 506 aaPredicted RBP6.1□□□□□ -1.43
AFP-203ENST00000506820 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 KCNA1Q09470 495 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 ZAR1Q86SH2 424 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 TRIM56Q9BRZ2 755 aaKnown RBP6.1□□□□□ -1.43
AFP-203ENST00000506820 EMILIN2Q9BXX0 1053 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 ATXN3LQ9H3M9 355 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 PRKAG2Q9UGJ0 569 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 AKAP2Q9Y2D5 859 aa6.1□□□□□ -1.43
AFP-203ENST00000506820 PNMA6FA0A0J9YX94 578 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 IGHA2P01877 340 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 SPINK2P20155 84 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 CYP27C1Q4G0S4 372 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 BCO2Q9BYV7 579 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 SRCIN1Q9C0H9 1055 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 KRT82Q9NSB4 513 aa6.09□□□□□ -1.43
AFP-203ENST00000506820 GIPC1O14908 333 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 TREHO43280 583 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 GSTP1P09211 210 aaKnown RBP6.08□□□□□ -1.44
AFP-203ENST00000506820 ID3Q02535 119 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 ENOX2Q16206 610 aaKnown RBP6.08□□□□□ -1.44
AFP-203ENST00000506820 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.08□□□□□ -1.447e-35■■■■■ 27.6
AFP-203ENST00000506820 ALG1LQ6GMV1 187 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 GLIS3Q8NEA6 775 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 FBF1Q8TES7 1133 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 KCNB2Q92953 911 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 WDR18Q9BV38 432 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 ZC3H12CQ9C0D7 883 aaKnown RBP6.08□□□□□ -1.44
AFP-203ENST00000506820 CEP44Q9C0F1 390 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 SEMA6CQ9H3T2 930 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 ACSS3Q9H6R3 686 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 FAM105AQ9NUU6 356 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 DAGLAQ9Y4D2 1042 aa6.08□□□□□ -1.44
AFP-203ENST00000506820 ECEL1O95672 775 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 CTSBP07858 339 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 GSTT1P30711 240 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 MAPK8P45983 427 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 MCTP1Q6DN14 999 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 FBXL18Q96ME1 805 aa6.07□□□□□ -1.44
AFP-203ENST00000506820 SSU72Q9NP77 194 aaKnown RBP6.07□□□□□ -1.44
AFP-203ENST00000506820 COL17A1Q9UMD9 1497 aaPredicted RBP6.07□□□□□ -1.44
AFP-203ENST00000506820 RNGTTO60942 597 aaKnown RBP6.06□□□□□ -1.44
AFP-203ENST00000506820 LIG1P18858 919 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 FGD1P98174 961 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 FAAP100Q0VG06 881 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 DSC3Q14574 896 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 NXPE4Q6UWF7 544 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 SULF2Q8IWU5 870 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 ACSBG1Q96GR2 724 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 GSX1Q9H4S2 264 aaPredicted RBP6.06□□□□□ -1.44
AFP-203ENST00000506820 CCDC86Q9H6F5 360 aaKnown RBP6.06□□□□□ -1.44
AFP-203ENST00000506820 CBX8Q9HC52 389 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 LRRC4CQ9HCJ2 640 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 BSDC1Q9NW68 430 aaPredicted RBP6.06□□□□□ -1.44
AFP-203ENST00000506820 SPG7Q9UQ90 795 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 IVNS1ABPQ9Y6Y0 642 aa6.06□□□□□ -1.44
AFP-203ENST00000506820 NME2P22392 152 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 ARNTP27540 789 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 HOXA10P31260 410 aaPredicted RBP6.05□□□□□ -1.44
AFP-203ENST00000506820 ADMP35318 185 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 KIF4BQ2VIQ3 1234 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 OGFOD3Q6PK18 319 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 ARHGAP27Q6ZUM4 889 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 VSIG10LQ86VR7 867 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 TP53INP2Q8IXH6 220 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 SMYD4Q8IYR2 804 aaPredicted RBP6.05□□□□□ -1.44
AFP-203ENST00000506820 PICK1Q9NRD5 415 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 CRIM1Q9NZV1 1036 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
AFP-203ENST00000506820 OAS3Q9Y6K5 1087 aaKnown RBP6.05□□□□□ -1.44
AFP-203ENST00000506820 FAM170BA6NMN3 283 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 TMPRSS2O15393 492 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 TXKP42681 527 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 PI16Q6UXB8 463 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 AGBL5Q8NDL9 886 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 ASB16Q96NS5 453 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 FANCD2OSQ96PS1 177 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 LGR6Q9HBX8 967 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 CCDC39Q9UFE4 941 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 PCOLCE2Q9UKZ9 415 aa6.04□□□□□ -1.44
AFP-203ENST00000506820 PPM1HQ9ULR3 514 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms