RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 ZAP70P43403 619 aa5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 ELOAQ14241 798 aaKnown RBP5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 NAA30Q147X3 362 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 TTC39BQ5VTQ0 682 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 KCNC2Q96PR1 638 aa5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 ACSS3Q9H6R3 686 aa5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 CXXC1Q9P0U4 656 aaPredicted RBP5.49□□□□□ -1.53
TOPBP1-205ENST00000506779 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 ADH5P11766 374 aa5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 IFI16Q16666 785 aaKnown RBP5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 KIRREL1Q96J84 757 aa5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 TIMELESSQ9UNS1 1208 aa5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 U3KQE9 123 aa5.48□□□□□ -1.53
TOPBP1-205ENST00000506779 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 SOX1O00570 391 aaPredicted RBP5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 TNFRSF10BO14763 440 aa5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 CELA3BP08861 270 aa5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 ABTB2Q8N961 1025 aa5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 GPR152Q8TDT2 470 aa5.47□□□□□ -1.53
TOPBP1-205ENST00000506779 AKAP8O43823 692 aaKnown RBP5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 FAM69CQ0P6D2 419 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 FAM26DQ5JW98 314 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 TMEM164Q5U3C3 297 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 CAPN12Q6ZSI9 719 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 NCAPG2Q86XI2 1143 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 FAM105AQ9NUU6 356 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 STIM2Q9P246 746 aa5.46□□□□□ -1.54
TOPBP1-205ENST00000506779 TMEM265A0A087WTH1 108 aa5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 ATG7O95352 703 aa5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 WDR26Q9H7D7 661 aa5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 DCP1AQ9NPI6 582 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 ABI2Q9NYB9 513 aaPredicted RBP5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 SOX13Q9UN79 622 aa5.45□□□□□ -1.54
TOPBP1-205ENST00000506779 CYP2E1P05181 493 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-205ENST00000506779 DYMQ7RTS9 669 aa5.44□□□□□ -1.54
TOPBP1-205ENST00000506779 ZNF438Q7Z4V0 828 aa5.44□□□□□ -1.54
TOPBP1-205ENST00000506779 MARCH10Q8NA82 808 aaPredicted RBP5.44□□□□□ -1.54
TOPBP1-205ENST00000506779 LGR6Q9HBX8 967 aa5.44□□□□□ -1.54
TOPBP1-205ENST00000506779 INSRRP14616 1297 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 ZP2Q05996 745 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 PUM1Q14671 1186 aaKnown RBP eCLIP5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 TTC16Q8NEE8 873 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 KCNN1Q92952 543 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 CLP1Q92989 425 aaKnown RBP5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 CCDC97Q96F63 343 aaPredicted RBP5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 EPB41L4BQ9H329 900 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 KANSL3Q9P2N6 904 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 PLAGL2Q9UPG8 496 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 DAGLAQ9Y4D2 1042 aa5.43□□□□□ -1.54
TOPBP1-205ENST00000506779 NFKBIEO00221 500 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 ZBTB39O15060 712 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 FAM87AP0C7U9 286 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 PCSK2P16519 638 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 ATP2B4P23634 1241 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 IKBKEQ14164 716 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 PDE12Q6L8Q7 609 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 CYFIP1Q7L576 1253 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 PBXIP1Q96AQ6 731 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 NUDT16Q96DE0 195 aaKnown RBP5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 ELP3Q9H9T3 547 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 MKNK2Q9HBH9 465 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 TMEM63CQ9P1W3 806 aa5.42□□□□□ -1.54
TOPBP1-205ENST00000506779 PDE2AO00408 941 aaPredicted RBP5.41□□□□□ -1.54
TOPBP1-205ENST00000506779 RPLP1P05386 114 aaKnown RBP5.41□□□□□ -1.54
TOPBP1-205ENST00000506779 ASPAP45381 313 aa5.41□□□□□ -1.54
TOPBP1-205ENST00000506779 C14orf37Q86TY3 774 aa5.41□□□□□ -1.54
TOPBP1-205ENST00000506779 CEACAM5P06731 702 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 OXCT1P55809 520 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 SRPK2P78362 688 aaKnown RBP5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 IKZF1Q13422 519 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 VN1R5Q7Z5H4 357 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 ATCAYQ86WG3 371 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 EDEM1Q92611 657 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 SOX17Q9H6I2 414 aaPredicted RBP5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 SEPT3Q9UH03 358 aa5.4□□□□□ -1.54
TOPBP1-205ENST00000506779 TRIM13O60858 407 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 ACPPP15309 386 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 CES1P23141 567 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 DNM1Q05193 864 aaKnown RBP5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 CDK5R2Q13319 367 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 ERICH6BQ5W0A0 696 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 HHIPQ96QV1 700 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 XYLT2Q9H1B5 865 aa5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 GSX1Q9H4S2 264 aaPredicted RBP5.39□□□□□ -1.55
TOPBP1-205ENST00000506779 C8orf34Q49A92 452 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 ARHGAP27Q6ZUM4 889 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 LSRQ86X29 649 aaPredicted RBP5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 HELQQ8TDG4 1101 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 SLC26A8Q96RN1 970 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 DZANK1Q9NVP4 752 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 SERPINA10Q9UK55 444 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 SNX11Q9Y5W9 270 aa5.38□□□□□ -1.55
TOPBP1-205ENST00000506779 TRPA1O75762 1119 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 SPATS1Q496A3 300 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 NOM1Q5C9Z4 860 aaKnown RBP5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 AKAP4Q5JQC9 854 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 C1orf127Q8N9H9 656 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 ASB11Q8WXH4 323 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 TNKS2Q9H2K2 1166 aa5.37□□□□□ -1.55
TOPBP1-205ENST00000506779 CNTN3Q9P232 1028 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms