RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 EMILIN2Q9BXX0 1053 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 METTL5Q9NRN9 209 aaKnown RBP4.98□□□□□ -1.61
GYPB-207ENST00000506679 CYP8B1Q9UNU6 501 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 SAMM50Q9Y512 469 aa4.98□□□□□ -1.61
GYPB-207ENST00000506679 TRIM37O94972 964 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 RLBP1P12271 317 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 UVSSAQ2YD98 709 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 TTBK2Q6IQ55 1244 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 LLGL2Q6P1M3 1020 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 PHC3Q8NDX5 983 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 GRIN3AQ8TCU5 1115 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 GAL3ST3Q96A11 431 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 WDR89Q96FK6 387 aaPredicted RBP4.97□□□□□ -1.61
GYPB-207ENST00000506679 FAM46AQ96IP4 442 aaKnown RBP4.97□□□□□ -1.61
GYPB-207ENST00000506679 RHOVQ96L33 236 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 UBL7Q96S82 380 aaPredicted RBP4.97□□□□□ -1.61
GYPB-207ENST00000506679 RSRP1Q9BUV0 290 aa4.97□□□□□ -1.61
GYPB-207ENST00000506679 GSX1Q9H4S2 264 aaPredicted RBP4.97□□□□□ -1.61
GYPB-207ENST00000506679 AOC2O75106 756 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 IGHA1P01876 353 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 ADH5P11766 374 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 PREPP48147 710 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 LRRC14Q15048 493 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 TSNAXIP1Q2TAA8 658 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 NUTM2GQ5VZR2 741 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 MPRIPQ6WCQ1 1025 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.96□□□□□ -1.62
GYPB-207ENST00000506679 ARMC10Q8N2F6 343 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 TMEM87AQ8NBN3 555 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 CEP41Q9BYV8 373 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 CYP4F12Q9HCS2 524 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 KCNQ5Q9NR82 932 aa4.96□□□□□ -1.62
GYPB-207ENST00000506679 MSTNO14793 375 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 SCAMP3O14828 347 aaKnown RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 TMPRSS2O15393 492 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 GLB1P16278 677 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 LIG1P18858 919 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 TFE3P19532 575 aaPredicted RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 SOX4Q06945 474 aaPredicted RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 PDE3AQ14432 1141 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 MAP1SQ66K74 1059 aaPredicted RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 C2CD4AQ8NCU7 369 aaPredicted RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 GPBAR1Q8TDU6 330 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 ZC3H12CQ9C0D7 883 aaKnown RBP4.95□□□□□ -1.62
GYPB-207ENST00000506679 TPSG1Q9NRR2 321 aa4.95□□□□□ -1.62
GYPB-207ENST00000506679 GARTP22102 1010 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 ZNF76P36508 570 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 RBM25P49756 843 aaKnown RBP4.94□□□□□ -1.62
GYPB-207ENST00000506679 PTPN11Q06124 597 aaPredicted RBP4.94□□□□□ -1.62
GYPB-207ENST00000506679 PWP1Q13610 501 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 MAP3K11Q16584 847 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 GPAT2Q6NUI2 795 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 FDX2Q6P4F2 183 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 HS2ST1Q7LGA3 356 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 CCDC84Q86UT8 332 aaPredicted RBP4.94□□□□□ -1.62
GYPB-207ENST00000506679 METTL16Q86W50 562 aaKnown RBP4.94□□□□□ -1.62
GYPB-207ENST00000506679 TRIM42Q8IWZ5 723 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 KCNB2Q92953 911 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 MYRFLQ96LU7 910 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 TMEM74Q96NL1 305 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 CBX8Q9HC52 389 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 COPRSQ9NQ92 184 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 IGSF5Q9NSI5 407 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 KBTBD4Q9NVX7 518 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 CRIM1Q9NZV1 1036 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 PPP1R9AQ9ULJ8 1098 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 TLR6Q9Y2C9 796 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 HIF3AQ9Y2N7 669 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 PCDHB5Q9Y5E4 795 aa4.94□□□□□ -1.62
GYPB-207ENST00000506679 DRD2P14416 443 aa4.93□□□□□ -1.62
GYPB-207ENST00000506679 HNRNPUQ00839 825 aaKnown RBP eCLIP4.93□□□□□ -1.62
GYPB-207ENST00000506679 LMNB2Q03252 620 aa4.93□□□□□ -1.62
GYPB-207ENST00000506679 RING1Q06587 406 aa4.93□□□□□ -1.62
GYPB-207ENST00000506679 ZC3H12AQ5D1E8 599 aaKnown RBP4.93□□□□□ -1.62
GYPB-207ENST00000506679 NKAPLQ5M9Q1 402 aa4.93□□□□□ -1.62
GYPB-207ENST00000506679 ACTL7BQ9Y614 415 aa4.93□□□□□ -1.62
GYPB-207ENST00000506679 H2AFB1P0C5Y9 115 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 H2AFB2P0C5Z0 115 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 SLFN14P0C7P3 912 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 NTF4P34130 210 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 ERVK-24P63145 666 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 HDLBPQ00341 1268 aaKnown RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 ID3Q02535 119 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 CAMK2GQ13555 558 aaPredicted RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 SEPT6Q14141 434 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 RSPO4Q2I0M5 234 aaPredicted RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 AKAP4Q5JQC9 854 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 FAM20CQ8IXL6 584 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 C12orf50Q8NA57 414 aaPredicted RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 EZH1Q92800 747 aaPredicted RBP4.92□□□□□ -1.62
GYPB-207ENST00000506679 RNF34Q969K3 372 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 TP53INP1Q96A56 240 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 DISC1Q9NRI5 854 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 RAD18Q9NS91 495 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 GGT7Q9UJ14 662 aa4.92□□□□□ -1.62
GYPB-207ENST00000506679 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.91□□□□□ -1.62
GYPB-207ENST00000506679 FAM221AA4D161 298 aa4.91□□□□□ -1.62
GYPB-207ENST00000506679 F6X3S4 739 aa4.91□□□□□ -1.62
GYPB-207ENST00000506679 GREM1O60565 184 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms