RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 PERM1Q5SV97 790 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ZNF746Q6NUN9 644 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 BNC2Q6ZN30 1099 aaPredicted RBP4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 VN1R5Q7Z5H4 357 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 SULF2Q8IWU5 870 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 CACTIN-AS1Q8N1I8 211 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 ANAPC16Q96DE5 110 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 CRBNQ96SW2 442 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 LRRC3Q9BY71 257 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 SMG9Q9H0W8 520 aaKnown RBP4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 RRAGCQ9HB90 399 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 CBX8Q9HC52 389 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 PRKAG3Q9UGI9 489 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 SOX13Q9UN79 622 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 TBX22Q9Y458 520 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 PCDHB5Q9Y5E4 795 aa4.74□□□□□ -1.65
TRAPPC11-205ENST00000506426 FAM221AA4D161 298 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 ANKRD62A6NC57 917 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 ADARB2-AS1A8MUL3 147 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 C1QTNF9BB2RNN3 333 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 KLF4O43474 513 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 EIF4EBP3O60516 100 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 BPNT1O95861 308 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 ARAFP10398 606 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 HOXB4P17483 251 aaPredicted RBP4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 CDC27P30260 824 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 ADH7P40394 386 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 EIF6P56537 245 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 SERINC3Q13530 473 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 RAB33AQ14088 237 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 IKBKEQ14164 716 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 TNNI3KQ59H18 835 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 SCARA3Q6AZY7 606 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 SDE2Q6IQ49 451 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 LLGL2Q6P1M3 1020 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 FBXO27Q8NI29 283 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 TTC9Q92623 222 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 FERD3LQ96RJ6 166 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 LACRTQ9GZZ8 138 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 FRRS1LQ9P0K9 344 aa4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 NSFL1CQ9UNZ2 370 aaKnown RBP4.73□□□□□ -1.65
TRAPPC11-205ENST00000506426 PPM1GO15355 546 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 CILPO75339 1184 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 CLSTN1O94985 981 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 ESRRAP11474 423 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 IMPDH2P12268 514 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 MAP2K3P46734 347 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 FBXW10Q5XX13 1052 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 LINC00114Q6XXX2 140 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 CCDC81Q6ZN84 652 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 CD163Q86VB7 1156 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 REXO1Q8N1G1 1221 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 OR6P1Q8NGX9 317 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 HNRNPLLQ8WVV9 542 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 SHDQ96IW2 340 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 SRPK1Q96SB4 655 aaKnown RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 LPIN3Q9BQK8 851 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 SH2B1Q9NRF2 756 aaPredicted RBP4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 PPT2Q9UMR5 302 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 TRIM33Q9UPN9 1127 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 RB1CC1Q8TDY2 1594 aa4.72□□□□□ -1.65
TRAPPC11-205ENST00000506426 SMAD7O15105 426 aaKnown RBP4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 RGS9O75916 674 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 ALAS2P22557 587 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 CHRNA4P43681 627 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 GIPRP48546 466 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 AP3B2Q13367 1082 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 SEPT6Q14141 434 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 DOC2BQ14184 412 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 RASIP1Q5U651 963 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 GDF6Q6KF10 455 aaPredicted RBP4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 PSAPL1Q6NUJ1 521 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 LRP10Q7Z4F1 713 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 REC114Q7Z4M0 266 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 GRIN3AQ8TCU5 1115 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 STK35Q8TDR2 534 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 SEMA6BQ9H3T3 888 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 BRMS1Q9HCU9 246 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 KLF15Q9UIH9 416 aa4.71□□□□□ -1.66
TRAPPC11-205ENST00000506426 ELOA3CA0A087WX78 387 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ELOA3DA6NLF2 546 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 NEURL1BA8MQ27 555 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 SOX1O00570 391 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 TRIM37O94972 964 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ARL4DP49703 201 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 RPL6Q02878 288 aaKnown RBP4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ZNF252P-AS1Q0IIN9 211 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ELOA3BQ3SY89 546 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 EGFLAMQ63HQ2 1017 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 FAM117BQ6P1L5 589 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ADAMTSL4Q6UY14 1074 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 GK5Q6ZS86 529 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 JAZF1Q86VZ6 243 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 ELOA3Q8NG57 546 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 EDARADDQ8WWZ3 215 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 SOX17Q9H6I2 414 aaPredicted RBP4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 NAGPAQ9UK23 515 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 MKL2Q9ULH7 1088 aa4.7□□□□□ -1.66
TRAPPC11-205ENST00000506426 SBNO2Q9Y2G9 1366 aa4.69□□□□□ -1.66
TRAPPC11-205ENST00000506426 H3BRJ5 948 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms