RNA–Protein interactions for RNA: ENST00000505017.1

DEPDC1B-203, Transcript of DEP domain containing 1B, humanhuman

TSL 3

Gene DEPDC1B, Length 854 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-203ENST00000505017 ZC3H12CQ9C0D7 883 aaKnown RBP8.98□□□□□ -0.97
DEPDC1B-203ENST00000505017 DCTN4Q9UJW0 460 aa8.98□□□□□ -0.97
DEPDC1B-203ENST00000505017 AP4E1Q9UPM8 1137 aa8.98□□□□□ -0.97
DEPDC1B-203ENST00000505017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 TMPRSS2O15393 492 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 TREHO43280 583 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 BRD1O95696 1058 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 ASPAP45381 313 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 FCGRTP55899 365 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 AP3B2Q13367 1082 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 ZNF765Q7L2R6 523 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 SETDB2Q96T68 719 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 BCO2Q9BYV7 579 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 RAD18Q9NS91 495 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 TRAK1Q9UPV9 953 aa8.97□□□□□ -0.97
DEPDC1B-203ENST00000505017 WNT11O96014 354 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 PDE3AQ14432 1141 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 COL19A1Q14993 1142 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 LGR6Q9HBX8 967 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 CRIM1Q9NZV1 1036 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 CCDC39Q9UFE4 941 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 SYNGAP1Q96PV0 1343 aa8.96□□□□□ -0.98
DEPDC1B-203ENST00000505017 PRNPP04156 253 aa8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 TAL1P17542 331 aaPredicted RBP8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 PDE4CQ08493 712 aa8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 ENOX2Q16206 610 aaKnown RBP8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 CPSF6Q16630 551 aaKnown RBP eCLIP8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 NXPE4Q6UWF7 544 aa8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 C3orf58Q8NDZ4 430 aa8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 BIN2Q9UBW5 565 aaPredicted RBP8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 ADGRE2Q9UHX3 823 aa8.95□□□□□ -0.98
DEPDC1B-203ENST00000505017 PNMA6FA0A0J9YX94 578 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 GSTP1P09211 210 aaKnown RBP8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 DTHD1Q6ZMT9 781 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 KRTAP1-3Q8IUG1 177 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 ABI1Q8IZP0 508 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 DDX54Q8TDD1 881 aaKnown RBP8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 YIPF2Q9BWQ6 316 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 ZFYVE1Q9HBF4 777 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 DISC1Q9NRI5 854 aa8.94□□□□□ -0.98
DEPDC1B-203ENST00000505017 CYP26A1O43174 497 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 IRAK1P51617 712 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 MAP7Q14244 749 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 KIF4BQ2VIQ3 1234 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 HP1BP3Q5SSJ5 553 aaPredicted RBP8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 ERICH6Q7L0X2 663 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 FANCD2OSQ96PS1 177 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 METTL22Q9BUU2 404 aaPredicted RBP8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 ZC3H7BQ9UGR2 993 aaKnown RBP8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 DAGLAQ9Y4D2 1042 aa8.93□□□□□ -0.98
DEPDC1B-203ENST00000505017 MAPK1P28482 360 aa8.92□□□□□ -0.98
DEPDC1B-203ENST00000505017 MPRIPQ6WCQ1 1025 aa8.92□□□□□ -0.98
DEPDC1B-203ENST00000505017 WFDC3Q8IUB2 231 aa8.92□□□□□ -0.98
DEPDC1B-203ENST00000505017 GIMAP7Q8NHV1 300 aa8.92□□□□□ -0.98
DEPDC1B-203ENST00000505017 U3KQE9 123 aa8.92□□□□□ -0.98
DEPDC1B-203ENST00000505017 PLCB3Q01970 1234 aa8.91□□□□□ -0.98
DEPDC1B-203ENST00000505017 OSBPL7Q9BZF2 842 aa8.91□□□□□ -0.98
DEPDC1B-203ENST00000505017 TMEM39AQ9NV64 488 aa8.91□□□□□ -0.98
DEPDC1B-203ENST00000505017 NLRP2Q9NX02 1062 aa8.91□□□□□ -0.98
DEPDC1B-203ENST00000505017 DCAF1Q9Y4B6 1507 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 CDK5R2Q13319 367 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 OGFOD3Q6PK18 319 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 KRT82Q9NSB4 513 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 CACNA2D2Q9NY47 1150 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 GPN3Q9UHW5 284 aaPredicted RBP8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 WWC3Q9ULE0 1092 aa8.9□□□□□ -0.98
DEPDC1B-203ENST00000505017 NEFMP07197 916 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 ID3Q02535 119 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 FMR1Q06787 632 aaKnown RBP eCLIP8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 ZNF252P-AS1Q0IIN9 211 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 LCE3BQ5TA77 95 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 FMNL2Q96PY5 1086 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 LRRC4CQ9HCJ2 640 aa8.89□□□□□ -0.99
DEPDC1B-203ENST00000505017 PAGE1O75459 146 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 TTLL4Q14679 1199 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 RASIP1Q5U651 963 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 CBLL1Q75N03 491 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 SULF2Q8IWU5 870 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 BSDC1Q9NW68 430 aaPredicted RBP8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 AKAP2Q9Y2D5 859 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 IVNS1ABPQ9Y6Y0 642 aa8.88□□□□□ -0.99
DEPDC1B-203ENST00000505017 ENC1O14682 589 aa8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 XRCC5P13010 732 aaKnown RBP8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 ARNTP27540 789 aa8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 DUSP27Q5VZP5 1158 aa8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 KCNB2Q92953 911 aa8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 PAK6Q9NQU5 681 aaPredicted RBP8.87□□□□□ -0.99
DEPDC1B-203ENST00000505017 HCLS1P14317 486 aaPredicted RBP8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 BMP6P22004 513 aa8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 ZC3H12AQ5D1E8 599 aaKnown RBP8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 VSIG10LQ86VR7 867 aa8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 GRIN3AQ8TCU5 1115 aa8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 NECAB3Q96P71 396 aaPredicted RBP8.86□□□□□ -0.99
DEPDC1B-203ENST00000505017 LEFTY1O75610 366 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 SLFN14P0C7P3 912 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 NME2P22392 152 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 NTF4P34130 210 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 PPP2R3AQ06190 1150 aa8.85□□□□□ -0.99
DEPDC1B-203ENST00000505017 SMYD4Q8IYR2 804 aaPredicted RBP8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms