RNA–Protein interactions for RNA: ENST00000504835.1

CDH6-202, Transcript of cadherin 6, humanhuman

TSL 5

Gene CDH6, Length 1,568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6-202ENST00000504835 BRCA2P51587 3418 aa10.9□□□□□ -0.66
CDH6-202ENST00000504835 RBBP6Q7Z6E9 1792 aaKnown RBP10.9□□□□□ -0.66
CDH6-202ENST00000504835 TM4SF4P48230 202 aa10.9□□□□□ -0.67
CDH6-202ENST00000504835 ZNF296Q8WUU4 475 aaPredicted RBP10.9□□□□□ -0.67
CDH6-202ENST00000504835 R3HDMLQ9H3Y0 253 aa10.9□□□□□ -0.67
CDH6-202ENST00000504835 LEMD3Q9Y2U8 911 aa10.9□□□□□ -0.67
CDH6-202ENST00000504835 ZNF804BA4D1E1 1349 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 MYO3BQ8WXR4 1341 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 SNAP23O00161 211 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 SMAPO00193 183 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 CSF1RP07333 972 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 ITGA6P23229 1130 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 PTPN12Q05209 780 aaKnown RBP10.89□□□□□ -0.67
CDH6-202ENST00000504835 NEXNQ0ZGT2 675 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 GCKRQ14397 625 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 TWISTNBQ3B726 338 aaPredicted RBP10.89□□□□□ -0.67
CDH6-202ENST00000504835 CERS5Q8N5B7 392 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 FZD1Q9UP38 647 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 PCDHAC2Q9Y5I4 1007 aa10.89□□□□□ -0.67
CDH6-202ENST00000504835 AOX1Q06278 1338 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 SPDYE16A6NNV3 312 aaPredicted RBP10.88□□□□□ -0.67
CDH6-202ENST00000504835 IGHMBP2P38935 993 aaKnown RBP10.88□□□□□ -0.67
CDH6-202ENST00000504835 CCDC27Q2M243 656 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 TTLL5Q6EMB2 1281 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 ERICH6Q7L0X2 663 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 KIAA0825Q8IV33 1275 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 WWC1Q8IX03 1113 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 HOMEZQ8IX15 550 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 STK31Q9BXU1 1019 aa10.88□□□□□ -0.67
CDH6-202ENST00000504835 COL1A1P02452 1464 aaPredicted RBP10.87□□□□□ -0.67
CDH6-202ENST00000504835 GPR25O00155 361 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 RNF40O75150 1001 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 GTF2IP78347 998 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 CHRNDQ07001 517 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 FLIIQ13045 1269 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 PRKG1Q13976 671 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 TTLL12Q14166 644 aaPredicted RBP10.87□□□□□ -0.67
CDH6-202ENST00000504835 LDLRAD1Q5T700 205 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 OGFOD1Q8N543 542 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 CHMP4AQ9BY43 222 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 CD209Q9NNX6 404 aa10.87□□□□□ -0.67
CDH6-202ENST00000504835 NOM1Q5C9Z4 860 aaKnown RBP10.86□□□□□ -0.67
CDH6-202ENST00000504835 APOBEC3FQ8IUX4 373 aaKnown RBP10.86□□□□□ -0.67
CDH6-202ENST00000504835 TATDN2Q93075 761 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 CFHR5Q9BXR6 569 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 ANKRD2Q9GZV1 360 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 PNMA3Q9UL41 463 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 TAF5LO75529 589 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 FOXO4P98177 505 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 SPRYD7Q5W111 196 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 HELBQ8NG08 1087 aaPredicted RBP10.86□□□□□ -0.67
CDH6-202ENST00000504835 DNAAF4Q8WXU2 420 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 ZNF516Q92618 1163 aa10.86□□□□□ -0.67
CDH6-202ENST00000504835 ANGEL1Q9UNK9 670 aaKnown RBP10.86□□□□□ -0.67
CDH6-202ENST00000504835 ZSWIM8A7E2V4 1837 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 MYH13Q9UKX3 1938 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 IL16Q14005 1332 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 FANCIQ9NVI1 1328 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 NF2P35240 595 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 MMP14P50281 582 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 PKN2Q16513 984 aaKnown RBP10.85□□□□□ -0.67
CDH6-202ENST00000504835 MAP3K11Q16584 847 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 C15orf52Q6ZUT6 534 aaKnown RBP10.85□□□□□ -0.67
CDH6-202ENST00000504835 LINS1Q8NG48 757 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 MPHOSPH8Q99549 860 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 HDAC9Q9UKV0 1011 aa10.85□□□□□ -0.67
CDH6-202ENST00000504835 KIAA0100Q14667 2235 aaKnown RBP10.84□□□□□ -0.67
CDH6-202ENST00000504835 VAMP4O75379 141 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 IL1R1P14778 569 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 SREBF2Q12772 1141 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 FKBP5Q13451 457 aaPredicted RBP10.84□□□□□ -0.67
CDH6-202ENST00000504835 EPHA10Q5JZY3 1008 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 ARMC9Q7Z3E5 817 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 MTMR14Q8NCE2 650 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 BBXQ8WY36 941 aaPredicted RBP10.84□□□□□ -0.67
CDH6-202ENST00000504835 CLMNQ96JQ2 1002 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 DEFB129Q9H1M3 183 aa10.84□□□□□ -0.67
CDH6-202ENST00000504835 ANKRD18BA2A2Z9 1011 aa10.83□□□□□ -0.68
CDH6-202ENST00000504835 F6X3S4 739 aa10.83□□□□□ -0.68
CDH6-202ENST00000504835 FBXO46Q6PJ61 603 aaPredicted RBP10.83□□□□□ -0.68
CDH6-202ENST00000504835 PRMT6Q96LA8 375 aaPredicted RBP10.83□□□□□ -0.68
CDH6-202ENST00000504835 MYH16Q9H6N6 1097 aa10.83□□□□□ -0.68
CDH6-202ENST00000504835 JAG2Q9Y219 1238 aa10.83□□□□□ -0.68
CDH6-202ENST00000504835 CLRN2A0PK11 232 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 F8W031 263 aaPredicted RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 IGF2BP3O00425 579 aaKnown RBP eCLIP10.82□□□□□ -0.68
CDH6-202ENST00000504835 FKTNO75072 461 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 GJA5P36382 358 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 KCNJ4P48050 445 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 DLGAP5Q15398 846 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 CFAP100Q494V2 611 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 BEND3Q5T5X7 828 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 PRPF38BQ5VTL8 546 aaKnown RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 WNK4Q96J92 1243 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 ZNF594Q96JF6 807 aaPredicted RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 TMUB1Q9BVT8 246 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 FKBP1AP62942 108 aaKnown RBP10.82□□□□□ -0.68
CDH6-202ENST00000504835 CAP1Q01518 475 aa10.82□□□□□ -0.68
CDH6-202ENST00000504835 EXOSC9Q06265 439 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms