RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 GPRC5DQ9NZD1 345 aa16.61■□□□□ 0.25
CYSTM1-202ENST00000504227 APOBEC3HQ6NTF7 200 aaKnown RBP16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 ZNF589Q86UQ0 364 aaPredicted RBP16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 MTMR14Q8NCE2 650 aa16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 RIOK1Q9BRS2 568 aaKnown RBP16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 BACH2Q9BYV9 841 aa16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 MYOZ2Q9NPC6 264 aa16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 ZNF646O15015 1829 aaPredicted RBP16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 MYH2Q9UKX2 1941 aa16.6■□□□□ 0.25
CYSTM1-202ENST00000504227 APPP05067 770 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 RBM26Q5T8P6 1007 aaKnown RBP16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 LCORLQ8N3X6 602 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 IL25Q9H293 177 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 ANO2Q9NQ90 1003 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 USP40Q9NVE5 1235 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 SLC4A4Q9Y6R1 1079 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 TIAM2Q8IVF5 1701 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 MAST2Q6P0Q8 1798 aa16.59■□□□□ 0.25
CYSTM1-202ENST00000504227 SHTN1A0MZ66 631 aa16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 SPDYE2BA6NHP3 402 aa16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 SPDYE6P0CI01 402 aa16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 TEX11Q8IYF3 940 aa16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 SH3RF3Q8TEJ3 882 aaPredicted RBP16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 L3MBTL3Q96JM7 780 aaPredicted RBP16.58■□□□□ 0.24
CYSTM1-202ENST00000504227 PATL2C9JE40 543 aaKnown RBP16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 MYO1BO43795 1136 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 SEC24BO95487 1268 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 EPS15P42566 896 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 TBC1D10BQ4KMP7 808 aaPredicted RBP16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 CDC42EP5Q6NZY7 148 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 DDRGK1Q96HY6 314 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 PRMT6Q96LA8 375 aaPredicted RBP16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 DSCC1Q9BVC3 393 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 NACAP1Q9BZK3 213 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 LSG1Q9H089 658 aaKnown RBP16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 PCDHAC2Q9Y5I4 1007 aa16.57■□□□□ 0.24
CYSTM1-202ENST00000504227 RPAP1Q9BWH6 1393 aaPredicted RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 PRKAB2O43741 272 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 HSPD1P10809 573 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 USP5P45974 858 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 RHBDL3P58872 404 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 KIF4BQ2VIQ3 1234 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 VPS53Q5VIR6 699 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 SAMD7Q7Z3H4 446 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 ZBED3Q96IU2 234 aaPredicted RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 TDRD3Q9H7E2 651 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 UPF2Q9HAU5 1272 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 ADARB2Q9NS39 739 aaKnown RBP16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 TMOD2Q9NZR1 351 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 HACL1Q9UJ83 578 aa16.56■□□□□ 0.24
CYSTM1-202ENST00000504227 IQCA1LA6NCM1 817 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 WNT10BO00744 389 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 EPB41L2O43491 1005 aaKnown RBP16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 PTH1RQ03431 593 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 MAP4K1Q92918 833 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 ATP8A2Q9NTI2 1148 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 CTNNA3Q9UI47 895 aa16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
CYSTM1-202ENST00000504227 ALX1Q15699 326 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 NBPF9Q3BBW0 867 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 GIMAP6Q6P9H5 292 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 IFNL3Q8IZI9 196 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 TGFBRAP1Q8WUH2 860 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 SDR42E1Q8WUS8 393 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 USP26Q9BXU7 913 aa16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 ZNF70Q9UC06 446 aaPredicted RBP16.54■□□□□ 0.24
CYSTM1-202ENST00000504227 MCCP23508 829 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 TDO2P48775 406 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 SPDYE2Q495Y8 402 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 MAPKAPK5Q8IW41 473 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 IDI2Q9BXS1 227 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 NAPBQ9H115 298 aa16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 RBM8AQ9Y5S9 174 aaKnown RBP16.53■□□□□ 0.24
CYSTM1-202ENST00000504227 CLRN2A0PK11 232 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 FOXP2O15409 715 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 WDHD1O75717 1129 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 EGFRP00533 1210 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 FGAP02671 866 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 EPHX2P34913 555 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 PICALMQ13492 652 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 FKBP1CQ5VVH2 108 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 USP50Q70EL3 339 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 TRPM4Q8TD43 1214 aa16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 DCP1AQ9NPI6 582 aaPredicted RBP16.52■□□□□ 0.24
CYSTM1-202ENST00000504227 NPM3O75607 178 aaKnown RBP16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 CACNB3P54284 484 aa16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 AMOTL1Q8IY63 956 aa16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 VEZTQ9HBM0 779 aa16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 EPB41L4AQ9HCS5 686 aaPredicted RBP16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 MCM9Q9NXL9 1143 aa16.51■□□□□ 0.23
CYSTM1-202ENST00000504227 ZMYM6O95789 1325 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 FLT1P17948 1338 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 TCP10L2B9ZVM9 353 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 ENTPD3O75355 529 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 VEGFAP15692 232 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 TNNI2P48788 182 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 HIRAP54198 1017 aaPredicted RBP16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 NFIAQ12857 509 aa16.5■□□□□ 0.23
CYSTM1-202ENST00000504227 RNF20Q5VTR2 975 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms