RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 ADORA1P30542 326 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 FKBP4Q02790 459 aaKnown RBP eCLIP11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 PI4K2BQ8TCG2 481 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 RUFY2Q8WXA3 655 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 PAG1Q9NWQ8 432 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 BCS1LQ9Y276 419 aa11.15□□□□□ -0.62
ARHGEF28-206ENST00000504003 PDS5AQ29RF7 1337 aaKnown RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 MYH13Q9UKX3 1938 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 CDC45O75419 566 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 GYG1P46976 350 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 SPTY2D1Q68D10 685 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 TMED8Q6PL24 325 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 FBXO33Q7Z6M2 555 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 FAM84BQ96KN1 310 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 PSMD1Q99460 953 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 FSD1Q9BTV5 496 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 RTFDC1Q9BY42 306 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 FHDC1Q9C0D6 1143 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 COA1Q9GZY4 146 aa11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 UPF2Q9HAU5 1272 aaKnown RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.14□□□□□ -0.63
ARHGEF28-206ENST00000504003 ZFYP08048 801 aaPredicted RBP11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 SDSP20132 328 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 PHKA1P46020 1223 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 TSHZ3Q63HK5 1081 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 SAMD7Q7Z3H4 446 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 PODNQ7Z5L7 613 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 C7orf43Q8WVR3 580 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 DIAPH3Q9NSV4 1193 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 POLLQ9UGP5 575 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 COL4A1P02462 1669 aa11.13□□□□□ -0.63
ARHGEF28-206ENST00000504003 BRCA1P38398 1863 aaKnown RBP11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 KIAA1551Q9HCM1 1747 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 GOLIM4O00461 696 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 GSPT1P15170 499 aaKnown RBP11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 MFAP1P55081 439 aaKnown RBP11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 MAP3K12Q12852 859 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 SYT17Q9BSW7 474 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 TAOK3Q9H2K8 898 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 LRP2BPQ9P2M1 347 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 PNMA3Q9UL41 463 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 RFX7Q2KHR2 1363 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 ARFGEF1Q9Y6D6 1849 aa11.12□□□□□ -0.63
ARHGEF28-206ENST00000504003 SNAP23O00161 211 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 SMAPO00193 183 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 PPIP5K2O43314 1243 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 MAP4K4O95819 1239 aaPredicted RBP11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 IL1R1P14778 569 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 MCAMP43121 646 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 SLF2Q8IX21 1173 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 KBTBD3Q8NAB2 608 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 JDP2Q8WYK2 163 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 TATDN2Q93075 761 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 CD209Q9NNX6 404 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 LTBP1Q14766 1721 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 DUOX1Q9NRD9 1551 aa11.11□□□□□ -0.63
ARHGEF28-206ENST00000504003 ZAP70P43403 619 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 KIAA2012Q0VF49 1180 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 RASGRF1Q13972 1273 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 KIAA1211Q6ZU35 1233 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 ERICH6Q7L0X2 663 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 LARGE2Q8N3Y3 721 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 NLGN2Q8NFZ4 835 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 TDRD7Q8NHU6 1098 aaKnown RBP11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 SNRKQ9NRH2 765 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 HMG20BQ9P0W2 317 aa11.1□□□□□ -0.63
ARHGEF28-206ENST00000504003 IDH1O75874 414 aaKnown RBP11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 REC8O95072 547 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 IARSP41252 1262 aaKnown RBP11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 GSTO1P78417 241 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 CHAF1AQ13111 956 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 OLFM4Q6UX06 510 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 NIM1KQ8IY84 436 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 RAI14Q9P0K7 980 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 ABCF2Q9UG63 623 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 IQSEC3Q9UPP2 1182 aaPredicted RBP11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 SUGT1Q9Y2Z0 365 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 MAST3O60307 1309 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 RAD50Q92878 1312 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 LTBP3Q9NS15 1303 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 SALL1Q9NSC2 1324 aa11.09□□□□□ -0.63
ARHGEF28-206ENST00000504003 CHD4Q14839 1912 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 RNF40O75150 1001 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 CYP2E1P05181 493 aaPredicted RBP11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 LDHBP07195 334 aaKnown RBP11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 LDHCP07864 332 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 KLRK1P26718 216 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 AOC3Q16853 763 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 TTLL5Q6EMB2 1281 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 ARHGAP27Q6ZUM4 889 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 TXNRD3Q86VQ6 643 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 CERS3Q8IU89 383 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 FER1L6Q2WGJ9 1857 aa11.08□□□□□ -0.64
ARHGEF28-206ENST00000504003 CCDC88AQ3V6T2 1871 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms