RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 DCAF15Q66K64 600 aa27.25■■□□□ 1.95
LSM6-203ENST00000503982 XAGE2Q96GT9 111 aa27.25■■□□□ 1.95
LSM6-203ENST00000503982 USP40Q9NVE5 1235 aa27.25■■□□□ 1.95
LSM6-203ENST00000503982 ZBED9Q6R2W3 1325 aa27.24■■□□□ 1.95
LSM6-203ENST00000503982 IGF2BP3O00425 579 aaKnown RBP eCLIP27.24■■□□□ 1.95
LSM6-203ENST00000503982 TCP10Q12799 353 aa27.24■■□□□ 1.95
LSM6-203ENST00000503982 OS9Q13438 667 aaPredicted RBP27.24■■□□□ 1.95
LSM6-203ENST00000503982 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.24■■□□□ 1.95
LSM6-203ENST00000503982 DDX55Q8NHQ9 600 aaKnown RBP eCLIP27.24■■□□□ 1.95
LSM6-203ENST00000503982 OTUD5Q96G74 571 aa27.24■■□□□ 1.95
LSM6-203ENST00000503982 WRNIP1Q96S55 665 aa27.24■■□□□ 1.95
LSM6-203ENST00000503982 R3HDMLQ9H3Y0 253 aa27.24■■□□□ 1.95
LSM6-203ENST00000503982 SALL1Q9NSC2 1324 aa27.23■■□□□ 1.95
LSM6-203ENST00000503982 PNMA6EA0A0J9YXQ4 647 aa27.23■■□□□ 1.95
LSM6-203ENST00000503982 CDC42EP5Q6NZY7 148 aa27.23■■□□□ 1.95
LSM6-203ENST00000503982 ITPRIPQ8IWB1 547 aa27.23■■□□□ 1.95
LSM6-203ENST00000503982 RASGRF1Q13972 1273 aa27.22■■□□□ 1.95
LSM6-203ENST00000503982 PKN2Q16513 984 aaKnown RBP27.22■■□□□ 1.95
LSM6-203ENST00000503982 SPTY2D1Q68D10 685 aaPredicted RBP27.22■■□□□ 1.95
LSM6-203ENST00000503982 MIGA2Q7L4E1 593 aa27.22■■□□□ 1.95
LSM6-203ENST00000503982 FAM151AQ8WW52 585 aa27.22■■□□□ 1.95
LSM6-203ENST00000503982 CNKSR2Q8WXI2 1034 aa27.22■■□□□ 1.95
LSM6-203ENST00000503982 MLLT1Q03111 559 aaPredicted RBP27.21■■□□□ 1.95
LSM6-203ENST00000503982 SLF2Q8IX21 1173 aa27.21■■□□□ 1.95
LSM6-203ENST00000503982 CFHR5Q9BXR6 569 aa27.21■■□□□ 1.95
LSM6-203ENST00000503982 ZNF341Q9BYN7 854 aa27.21■■□□□ 1.95
LSM6-203ENST00000503982 NOM1Q5C9Z4 860 aaKnown RBP27.2■■□□□ 1.94
LSM6-203ENST00000503982 ZKSCAN4Q969J2 545 aaPredicted RBP27.2■■□□□ 1.94
LSM6-203ENST00000503982 C1orf115Q9H7X2 142 aa27.2■■□□□ 1.94
LSM6-203ENST00000503982 RPAP1Q9BWH6 1393 aaPredicted RBP27.2■■□□□ 1.94
LSM6-203ENST00000503982 CCL15-CCL14A0A0B4J2E2 113 aa27.19■■□□□ 1.94
LSM6-203ENST00000503982 GTF2A2P52657 109 aa27.19■■□□□ 1.94
LSM6-203ENST00000503982 CCL15Q16663 113 aa27.19■■□□□ 1.94
LSM6-203ENST00000503982 ERICH6Q7L0X2 663 aa27.19■■□□□ 1.94
LSM6-203ENST00000503982 SOX10P56693 466 aa27.18■■□□□ 1.94
LSM6-203ENST00000503982 HPS5Q9UPZ3 1129 aa27.18■■□□□ 1.94
LSM6-203ENST00000503982 NFIAQ12857 509 aa27.17■■□□□ 1.94
LSM6-203ENST00000503982 CRHR2Q13324 411 aa27.17■■□□□ 1.94
LSM6-203ENST00000503982 ZSCAN29Q8IWY8 852 aaPredicted RBP27.17■■□□□ 1.94
LSM6-203ENST00000503982 SNCAIPQ9Y6H5 919 aa27.17■■□□□ 1.94
LSM6-203ENST00000503982 DOCK2Q92608 1830 aa27.16■■□□□ 1.94
LSM6-203ENST00000503982 ERO1BQ86YB8 467 aa27.16■■□□□ 1.94
LSM6-203ENST00000503982 PTPN18Q99952 460 aa27.16■■□□□ 1.94
LSM6-203ENST00000503982 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.16■■□□□ 1.94
LSM6-203ENST00000503982 PDS5AQ29RF7 1337 aaKnown RBP27.16■■□□□ 1.94
LSM6-203ENST00000503982 SPDYE5A6NIY4 337 aa27.15■■□□□ 1.94
LSM6-203ENST00000503982 WDHD1O75717 1129 aaPredicted RBP27.15■■□□□ 1.94
LSM6-203ENST00000503982 TAF1CQ15572 869 aaPredicted RBP27.15■■□□□ 1.94
LSM6-203ENST00000503982 BRI3BPQ8WY22 251 aa27.15■■□□□ 1.94
LSM6-203ENST00000503982 ERO1AQ96HE7 468 aa27.15■■□□□ 1.94
LSM6-203ENST00000503982 TRIM17Q9Y577 477 aa27.15■■□□□ 1.94
LSM6-203ENST00000503982 TESPA1A2RU30 521 aaPredicted RBP27.14■■□□□ 1.94
LSM6-203ENST00000503982 SURF6O75683 361 aaKnown RBP27.14■■□□□ 1.94
LSM6-203ENST00000503982 BTDP43251 543 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 RGS3P49796 1198 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 ATP8B2P98198 1209 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 FBXO46Q6PJ61 603 aaPredicted RBP27.14■■□□□ 1.94
LSM6-203ENST00000503982 MS4A4AQ96JQ5 239 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 RAI14Q9P0K7 980 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 HMG20BQ9P0W2 317 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 FAM198AQ9UFP1 575 aa27.14■■□□□ 1.94
LSM6-203ENST00000503982 INPP5BP32019 993 aa27.13■■□□□ 1.93
LSM6-203ENST00000503982 PICALMQ13492 652 aa27.13■■□□□ 1.93
LSM6-203ENST00000503982 TTC39AQ5SRH9 613 aa27.13■■□□□ 1.93
LSM6-203ENST00000503982 SPATA5Q8NB90 893 aa27.13■■□□□ 1.93
LSM6-203ENST00000503982 ZFYVE28Q9HCC9 887 aa27.13■■□□□ 1.93
LSM6-203ENST00000503982 UQCRFS1P1P0C7P4 283 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 CETPP11597 493 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 RLBP1P12271 317 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 RGS19P49795 217 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 PI16Q6UXB8 463 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 CD99L2Q8TCZ2 262 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 MROH7-TTC4A0A0A0MT08 1334 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 GAKO14976 1311 aa27.12■■□□□ 1.93
LSM6-203ENST00000503982 ZBTB22O15209 634 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 GSTO1P78417 241 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 MECOMQ03112 1051 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 SNAPC2Q13487 334 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 POLA2Q14181 598 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 TBC1D9Q6ZT07 1266 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 ZFPM1Q8IX07 1006 aa27.11■■□□□ 1.93
LSM6-203ENST00000503982 LDHCP07864 332 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 SP3Q02447 781 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 PPIL2Q13356 520 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 CCDC158Q5M9N0 1113 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 SSH3Q8TE77 659 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 LRP2BPQ9P2M1 347 aa27.1■■□□□ 1.93
LSM6-203ENST00000503982 IRF6O14896 467 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 ENTPD3O75355 529 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 ARID4AP29374 1257 aaPredicted RBP27.09■■□□□ 1.93
LSM6-203ENST00000503982 PPATQ06203 517 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 TNNI3KQ59H18 835 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 FAM43AQ8N2R8 423 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 NOL10Q9BSC4 688 aaKnown RBP27.09■■□□□ 1.93
LSM6-203ENST00000503982 IDI2Q9BXS1 227 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 FPGT-TNNI3KV9GXZ4 949 aa27.09■■□□□ 1.93
LSM6-203ENST00000503982 ZBTB7BO15156 539 aaPredicted RBP27.08■■□□□ 1.93
LSM6-203ENST00000503982 OTOP1Q7RTM1 612 aa27.08■■□□□ 1.93
LSM6-203ENST00000503982 FAM163AQ96GL9 167 aaPredicted RBP27.08■■□□□ 1.93
LSM6-203ENST00000503982 SNRKQ9NRH2 765 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms