RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 ATG9AQ7Z3C6 839 aa11.28□□□□□ -0.6
PROM1-204ENST00000503884 TRMT2AQ8IZ69 625 aaKnown RBP11.28□□□□□ -0.6
PROM1-204ENST00000503884 ZCCHC17Q9NP64 241 aaKnown RBP11.28□□□□□ -0.6
PROM1-204ENST00000503884 MAST3O60307 1309 aa11.28□□□□□ -0.6
PROM1-204ENST00000503884 IFIT1P09914 478 aaKnown RBP11.27□□□□□ -0.61
PROM1-204ENST00000503884 TAF1CQ15572 869 aaPredicted RBP11.27□□□□□ -0.61
PROM1-204ENST00000503884 ERO1BQ86YB8 467 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 LPIN2Q92539 896 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 OTUD5Q96G74 571 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 ZFYVE28Q9HCC9 887 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 CSADQ9Y600 493 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 AK9Q5TCS8 1911 aa11.27□□□□□ -0.61
PROM1-204ENST00000503884 CEP290O15078 2479 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 IRF6O14896 467 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 FRAT2O75474 233 aaPredicted RBP11.26□□□□□ -0.61
PROM1-204ENST00000503884 PPIL2Q13356 520 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 WDR66Q8TBY9 1149 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 ZKSCAN4Q969J2 545 aaPredicted RBP11.26□□□□□ -0.61
PROM1-204ENST00000503884 ZNF333Q96JL9 665 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 WRNIP1Q96S55 665 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 ZNF112Q9UJU3 913 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 MYH2Q9UKX2 1941 aa11.26□□□□□ -0.61
PROM1-204ENST00000503884 BTBD19C9JJ37 291 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 TLR2O60603 784 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 CIAO1O76071 339 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 CETPP11597 493 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 PPATQ06203 517 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 FAM151AQ8WW52 585 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 HOOK2Q96ED9 719 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 CDCA7LQ96GN5 454 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 TMOD2Q9NZR1 351 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 DAGLAQ9Y4D2 1042 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 SALL1Q9NSC2 1324 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 DOCK2Q92608 1830 aa11.25□□□□□ -0.61
PROM1-204ENST00000503884 SLC5A1P13866 664 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 EN2P19622 333 aaPredicted RBP11.24□□□□□ -0.61
PROM1-204ENST00000503884 PRDX5P30044 214 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 INPP5BP32019 993 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 NFIAQ12857 509 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 SNAPC2Q13487 334 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 MOGSQ13724 837 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 DCAF15Q66K64 600 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 CDC42EP5Q6NZY7 148 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 ZNF341Q9BYN7 854 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 KCNH4Q9UQ05 1017 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 PTCH2Q9Y6C5 1203 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 PTPRFP10586 1907 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 ADGRA2Q96PE1 1338 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 ATRNL1Q5VV63 1379 aa11.24□□□□□ -0.61
PROM1-204ENST00000503884 PHIPQ8WWQ0 1821 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 MGAMO43451 1857 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 CTGFP29279 349 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 LACTBP83111 547 aaPredicted RBP11.23□□□□□ -0.61
PROM1-204ENST00000503884 ARHGEF6Q15052 776 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 DIXDC1Q155Q3 683 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 NOL9Q5SY16 702 aaKnown RBP11.23□□□□□ -0.61
PROM1-204ENST00000503884 C17orf99Q6UX52 265 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 MIGA2Q7L4E1 593 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 ARHGAP39Q9C0H5 1083 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 FAM198AQ9UFP1 575 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 RFX7Q2KHR2 1363 aa11.23□□□□□ -0.61
PROM1-204ENST00000503884 GAKO14976 1311 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 SEMA3EO15041 775 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 GNRH1P01148 92 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 CT47B1P0C2W7 299 aaPredicted RBP11.22□□□□□ -0.61
PROM1-204ENST00000503884 MAP3K10Q02779 954 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 ATP2B3Q16720 1220 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 ANKRD23Q86SG2 305 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 COPRSQ9NQ92 184 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 SMC4Q9NTJ3 1288 aa11.22□□□□□ -0.61
PROM1-204ENST00000503884 SZT2Q5T011 3432 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 RANBP2P49792 3224 aaKnown RBP11.21□□□□□ -0.61
PROM1-204ENST00000503884 PDS5AQ29RF7 1337 aaKnown RBP11.21□□□□□ -0.61
PROM1-204ENST00000503884 UBTFL1P0CB47 393 aaPredicted RBP11.21□□□□□ -0.61
PROM1-204ENST00000503884 IL15P40933 162 aaPredicted RBP11.21□□□□□ -0.61
PROM1-204ENST00000503884 PHKA1P46020 1223 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 PRMT2P55345 433 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 HNRNPUQ00839 825 aaKnown RBP eCLIP11.21□□□□□ -0.61
PROM1-204ENST00000503884 SLC9C1Q4G0N8 1177 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 NBPF11Q86T75 865 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 ZFPM1Q8IX07 1006 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 GCC1Q96CN9 775 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 IDI2Q9BXS1 227 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 SIL1Q9H173 461 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 CEP126Q9P2H0 1117 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 DENND2AQ9ULE3 1009 aa11.21□□□□□ -0.61
PROM1-204ENST00000503884 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
PROM1-204ENST00000503884 DOCK1Q14185 1865 aa11.21□□□□□ -0.62
PROM1-204ENST00000503884 ZBED9Q6R2W3 1325 aa11.2□□□□□ -0.62
PROM1-204ENST00000503884 PHF20L1A8MW92 1017 aa11.2□□□□□ -0.62
PROM1-204ENST00000503884 WDHD1O75717 1129 aaPredicted RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 LDHBP07195 334 aaKnown RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 TCP10Q12799 353 aa11.2□□□□□ -0.62
PROM1-204ENST00000503884 HABP4Q5JVS0 413 aaKnown RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 SH3BP5LQ7L8J4 393 aa11.2□□□□□ -0.62
PROM1-204ENST00000503884 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 FAM163AQ96GL9 167 aaPredicted RBP11.2□□□□□ -0.62
PROM1-204ENST00000503884 TMEM106CQ9BVX2 250 aa11.2□□□□□ -0.62
PROM1-204ENST00000503884 USP40Q9NVE5 1235 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms