RNA–Protein interactions for RNA: ENST00000503565.5

SCLT1-206, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 5

Gene SCLT1, Length 734 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-206ENST00000503565 NBPF6Q5VWK0 638 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 NXPE3Q969Y0 559 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 SPACA7Q96KW9 195 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 NBPF4Q96M43 638 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 UBP1Q9NZI7 540 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.1□□□□□ -1.27
SCLT1-206ENST00000503565 MRVI1Q9Y6F6 885 aa7.1□□□□□ -1.27
SCLT1-206ENST00000503565 LINC01387J3KSC0 135 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 SMNDC1O75940 238 aaKnown RBP eCLIP7.09□□□□□ -1.27
SCLT1-206ENST00000503565 RLBP1P12271 317 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 CRKP46108 304 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 RAC1P63000 192 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 ADGRE1Q14246 886 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 TXNDC11Q6PKC3 985 aa7.09□□□□□ -1.27
SCLT1-206ENST00000503565 LENG1Q96BZ8 264 aaPredicted RBP7.09□□□□□ -1.27
SCLT1-206ENST00000503565 MRPL42Q9Y6G3 142 aaKnown RBP7.09□□□□□ -1.27
SCLT1-206ENST00000503565 PDE2AO00408 941 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-206ENST00000503565 ENC1O14682 589 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 KLF4O43474 513 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 TFE3P19532 575 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-206ENST00000503565 ITPKAP23677 461 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 CDC27P30260 824 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 CAMK2GQ13555 558 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-206ENST00000503565 MBTPS1Q14703 1052 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 NFE2L2Q16236 605 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 HGSNATQ68CP4 663 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 ANKS3Q6ZW76 656 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 ANKRD13AQ8IZ07 590 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 TMEM102Q8N9M5 508 aaPredicted RBP7.08□□□□□ -1.28
SCLT1-206ENST00000503565 KCNK4Q9NYG8 393 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 PPME1Q9Y570 386 aa7.08□□□□□ -1.28
SCLT1-206ENST00000503565 SUPT16HQ9Y5B9 1047 aaKnown RBP7.08□□□□□ -1.28
SCLT1-206ENST00000503565 PAGE1O75459 146 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 APBA3O96018 575 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 CDC25BP30305 580 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 LMNB2Q03252 620 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 FAAP100Q0VG06 881 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 AGMOQ6ZNB7 445 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 GOLM1Q8NBJ4 401 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 HNRNPLLQ8WVV9 542 aaKnown RBP7.07□□□□□ -1.28
SCLT1-206ENST00000503565 MKL1Q969V6 931 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 MRFAP1L1Q96HT8 127 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 NECAB3Q96P71 396 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-206ENST00000503565 BHLHE41Q9C0J9 482 aaPredicted RBP7.07□□□□□ -1.28
SCLT1-206ENST00000503565 STRIP2Q9ULQ0 834 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 SOX13Q9UN79 622 aa7.07□□□□□ -1.28
SCLT1-206ENST00000503565 C9orf172C9J069 976 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 GATA4P43694 442 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 COL9A2Q14055 689 aaPredicted RBP7.06□□□□□ -1.28
SCLT1-206ENST00000503565 SNAP47Q5SQN1 464 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 PCNX4Q63HM2 1172 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 TTBK2Q6IQ55 1244 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 VN1R5Q7Z5H4 357 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 CACTIN-AS1Q8N1I8 211 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 SSBP4Q9BWG4 385 aaPredicted RBP7.06□□□□□ -1.28
SCLT1-206ENST00000503565 CEP44Q9C0F1 390 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 SEC31BQ9NQW1 1179 aa7.06□□□□□ -1.28
SCLT1-206ENST00000503565 PTPRAP18433 802 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 APOBRQ0VD83 1088 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 RAB33AQ14088 237 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 DOC2BQ14184 412 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 FOXD4L6Q3SYB3 417 aaPredicted RBP7.05□□□□□ -1.28
SCLT1-206ENST00000503565 IGF2-ASQ6U949 168 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 FOXD4L3Q6VB84 417 aaPredicted RBP7.05□□□□□ -1.28
SCLT1-206ENST00000503565 ANAPC16Q96DE5 110 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 GPATCH3Q96I76 525 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 SHDQ96IW2 340 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 CARD10Q9BWT7 1032 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 ZNF576Q9H609 170 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 SIRPGQ9P1W8 387 aa7.05□□□□□ -1.28
SCLT1-206ENST00000503565 A0A096LPE4 126 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 A0A1W2PPZ6 126 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 FSCN2O14926 492 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 ADAM11O75078 769 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 WISP1O95388 367 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 FURINP09958 794 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 ITGB7P26010 798 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 NOS3P29474 1203 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 RASIP1Q5U651 963 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 CCDC81Q6ZN84 652 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 FAM196AQ6ZSG2 479 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 SLITRK4Q8IW52 837 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 FBXO27Q8NI29 283 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 KLHDC7BQ96G42 594 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 NACC1Q96RE7 527 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 MUC3BQ9H195 1237 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 ZFYVE1Q9HBF4 777 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 TPSG1Q9NRR2 321 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 PRKAG3Q9UGI9 489 aa7.04□□□□□ -1.28
SCLT1-206ENST00000503565 FAM221BA6H8Z2 402 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 SOX1O00570 391 aaPredicted RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 DDX3YO15523 660 aaKnown RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 ALX3O95076 343 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 F13A1P00488 732 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 RPS26P62854 115 aaKnown RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 RASA3Q14644 834 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 BNC2Q6ZN30 1099 aaPredicted RBP7.03□□□□□ -1.28
SCLT1-206ENST00000503565 CPLX3Q8WVH0 158 aa7.03□□□□□ -1.28
SCLT1-206ENST00000503565 WFDC12Q8WWY7 111 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms