RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 LTBP3Q9NS15 1303 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 GPR75-ASB3A0A0A6YYF3 556 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 GSG1L2A8MUP6 293 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 FOXP2O15409 715 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 SLC3A2P08195 630 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 RPS6KB1P23443 525 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 AOC3Q16853 763 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 DOK7Q18PE1 504 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 ADCK5Q3MIX3 580 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 DHX32Q7L7V1 743 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 RALYLQ86SE5 291 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 SLC51AQ86UW1 340 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 FBXL16Q8N461 479 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 MIGA1Q8NAN2 632 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 NCOA7Q8NI08 942 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 TTC14Q96N46 770 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 UPF3BQ9BZI7 483 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 TAOK3Q9H2K8 898 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 CWC22Q9HCG8 908 aaKnown RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 SH2B1Q9NRF2 756 aaPredicted RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 LIMCH1Q9UPQ0 1083 aa9.64□□□□□ -0.87
TOPBP1-202ENST00000503338 E7EWF7 191 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 HHIPL2Q6UWX4 724 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 ADGRA1Q86SQ6 560 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 NIM1KQ8IY84 436 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 LARGE2Q8N3Y3 721 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 ZNF384Q8TF68 577 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 FBXW7Q969H0 707 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 INTS4Q96HW7 963 aaKnown RBP9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 MTA3Q9BTC8 594 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 KRT23Q9C075 422 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 DBNDD1Q9H9R9 158 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 AATFQ9NY61 560 aaKnown RBP eCLIP9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 ARPP21Q9UBL0 812 aaPredicted RBP9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 ANAPC4Q9UJX5 808 aa9.63□□□□□ -0.87
TOPBP1-202ENST00000503338 KIAA1551Q9HCM1 1747 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 MYO5AQ9Y4I1 1855 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 MCM5P33992 734 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 IARSP41252 1262 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 BTDP43251 543 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 USP5P45974 858 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 AK2P54819 239 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 FGD1P98174 961 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 SBK1Q52WX2 424 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 AKNAD1Q5T1N1 836 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 KLHL34Q8N239 644 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 STAG1Q8WVM7 1258 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 JDP2Q8WYK2 163 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 TEKT1Q969V4 418 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 ZNF287Q9HBT7 754 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 EPB41L4AQ9HCS5 686 aaPredicted RBP9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 TAOK2Q9UL54 1235 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 CIZ1Q9ULV3 898 aaPredicted RBP9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 TTF2Q9UNY4 1162 aaKnown RBP9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 JAG2Q9Y219 1238 aa9.62□□□□□ -0.87
TOPBP1-202ENST00000503338 PRKAB2O43741 272 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 CD2BP2O95400 341 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 PDIA4P13667 645 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 DYNLL1P63167 89 aaKnown RBP9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 PPARAQ07869 468 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 CUL4AQ13619 759 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 DACT2Q5SW24 774 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 MFSD6Q6ZSS7 791 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 SDR42E1Q8WUS8 393 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 TMX3Q96JJ7 454 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 DCP1AQ9NPI6 582 aaPredicted RBP9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 SERPINA10Q9UK55 444 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 HDAC9Q9UKV0 1011 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 ZNRF3Q9ULT6 936 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 BCS1LQ9Y276 419 aa9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.61□□□□□ -0.87
TOPBP1-202ENST00000503338 VIL1P09327 827 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 SLC4A3P48751 1232 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 HAND2P61296 217 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 EXOSC10Q01780 885 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 PDE4BQ07343 736 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 SART3Q15020 963 aaKnown RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 TNIP1Q15025 636 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 DIXDC1Q155Q3 683 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 RSBN1LQ6PCB5 846 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 STOX1Q6ZVD7 989 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 MB21D2Q8IYB1 491 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 TEX11Q8IYF3 940 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 TMTC2Q8N394 836 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 CERS5Q8N5B7 392 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 AGBL3Q8NEM8 1001 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 ESR2Q92731 530 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 TMEM87BQ96K49 555 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 ZDHHC15Q96MV8 337 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 AGXT2Q9BYV1 514 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 ZNF277Q9NRM2 450 aaPredicted RBP9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 DAGLAQ9Y4D2 1042 aa9.6□□□□□ -0.87
TOPBP1-202ENST00000503338 ERICH2A1L162 156 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 USP17L12C9JPN9 530 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 USP17L21D6R901 530 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 FGRP09769 529 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 CRKP46108 304 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 GRIK5Q16478 980 aa9.59□□□□□ -0.87
TOPBP1-202ENST00000503338 CCDC178Q5BJE1 867 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms