RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 TMX1Q9H3N1 280 aa28.26■■■□□ 2.12
DDX41-202ENST00000503078 ANGEL1Q9UNK9 670 aaKnown RBP28.26■■■□□ 2.12
DDX41-202ENST00000503078 CDKL5O76039 1030 aa28.26■■■□□ 2.11
DDX41-202ENST00000503078 PTPAQ15257 358 aa28.26■■■□□ 2.11
DDX41-202ENST00000503078 DNAI1Q9UI46 699 aa28.26■■■□□ 2.11
DDX41-202ENST00000503078 METAP2P50579 478 aaKnown RBP eCLIP28.25■■■□□ 2.113e-6■■■■□ 22.7
DDX41-202ENST00000503078 KRT40Q6A162 431 aa28.25■■■□□ 2.11
DDX41-202ENST00000503078 MYH7P12883 1935 aa28.25■■■□□ 2.11
DDX41-202ENST00000503078 PNOCQ13519 176 aa28.25■■■□□ 2.11
DDX41-202ENST00000503078 CFAP100Q494V2 611 aa28.25■■■□□ 2.11
DDX41-202ENST00000503078 UBR2Q8IWV8 1755 aa28.25■■■□□ 2.11
DDX41-202ENST00000503078 MYO1BO43795 1136 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 ISCA1Q9BUE6 129 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 NBPF3Q9H094 633 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 CLCN6P51797 869 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 ARHGAP29Q52LW3 1261 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 RESP18Q5W5W9 173 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 TRIM65Q6PJ69 517 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 VSTM4Q8IW00 320 aa28.24■■■□□ 2.11
DDX41-202ENST00000503078 GNL2Q13823 731 aaKnown RBP28.23■■■□□ 2.11
DDX41-202ENST00000503078 OLFM4Q6UX06 510 aa28.23■■■□□ 2.11
DDX41-202ENST00000503078 PI16Q6UXB8 463 aa28.23■■■□□ 2.11
DDX41-202ENST00000503078 MAP3K14Q99558 947 aa28.23■■■□□ 2.11
DDX41-202ENST00000503078 CPLX2Q6PUV4 134 aaKnown RBP28.23■■■□□ 2.11
DDX41-202ENST00000503078 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.23■■■□□ 2.112e-6■■■□□ 17.2
DDX41-202ENST00000503078 SH2B2O14492 632 aaPredicted RBP28.22■■■□□ 2.11
DDX41-202ENST00000503078 FAM193AP78312 1265 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 FCHSD1Q86WN1 690 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 KCPQ6ZWJ8 1503 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 CYB5R4Q7L1T6 521 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 SRRTQ9BXP5 876 aaKnown RBP28.22■■■□□ 2.11
DDX41-202ENST00000503078 DENND2AQ9ULE3 1009 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 FHOD1Q9Y613 1164 aa28.22■■■□□ 2.11
DDX41-202ENST00000503078 TOP1P11387 765 aaKnown RBP28.21■■■□□ 2.11
DDX41-202ENST00000503078 TAF7LQ5H9L4 462 aa28.21■■■□□ 2.11
DDX41-202ENST00000503078 BRINP3Q76B58 766 aa28.21■■■□□ 2.11
DDX41-202ENST00000503078 REXO1L1PQ8IX06 675 aa28.21■■■□□ 2.11
DDX41-202ENST00000503078 UTP14AQ9BVJ6 771 aaKnown RBP28.21■■■□□ 2.11
DDX41-202ENST00000503078 METTL16Q86W50 562 aaKnown RBP28.21■■■□□ 2.11
DDX41-202ENST00000503078 TBC1D10CQ8IV04 446 aa28.21■■■□□ 2.11
DDX41-202ENST00000503078 UBXN4Q92575 508 aa28.21■■■□□ 2.11
DDX41-202ENST00000503078 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.21■■■□□ 2.11
DDX41-202ENST00000503078 CUTAO60888 179 aa28.2■■■□□ 2.1
DDX41-202ENST00000503078 APOA5Q6Q788 366 aa28.2■■■□□ 2.1
DDX41-202ENST00000503078 CLIC6Q96NY7 704 aa28.2■■■□□ 2.1
DDX41-202ENST00000503078 ST7Q9NRC1 585 aa28.2■■■□□ 2.1
DDX41-202ENST00000503078 RXRAP19793 462 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 CDC27P30260 824 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 TCIRG1Q13488 830 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 CCDC102BQ68D86 513 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 PHKBQ93100 1093 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 FANCLQ9NW38 375 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 ERVV-2B6SEH9 535 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 ZSCAN12O43309 604 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 ADD2P35612 726 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 KRBA2Q6ZNG9 492 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 NKX2-3Q8TAU0 364 aa28.19■■■□□ 2.1
DDX41-202ENST00000503078 CCDC85AQ96PX6 553 aaPredicted RBP28.19■■■□□ 2.1
DDX41-202ENST00000503078 PCDH11XQ9BZA7 1347 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 PCDH11YQ9BZA8 1340 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 TMEM232C9JQI7 657 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 LONRF3Q496Y0 759 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 CREBRFQ8IUR6 639 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 CNNM3Q8NE01 707 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 ARGLU1Q9NWB6 273 aaPredicted RBP28.18■■■□□ 2.1
DDX41-202ENST00000503078 MCAMP43121 646 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 IFIT5Q13325 482 aaKnown RBP28.18■■■□□ 2.1
DDX41-202ENST00000503078 TRIM29Q14134 588 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 MNS1Q8NEH6 495 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 KCNH3Q9ULD8 1083 aa28.18■■■□□ 2.1
DDX41-202ENST00000503078 FOXP4Q8IVH2 680 aaPredicted RBP28.17■■■□□ 2.1
DDX41-202ENST00000503078 PCDHA5Q9Y5H7 936 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 STRCQ7RTU9 1775 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 FANCGO15287 622 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 ARHGAP6O43182 974 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 URI1O94763 535 aaPredicted RBP28.17■■■□□ 2.1
DDX41-202ENST00000503078 PNMA6AP0CW24 399 aaPredicted RBP28.17■■■□□ 2.1
DDX41-202ENST00000503078 IARSP41252 1262 aaKnown RBP28.17■■■□□ 2.1
DDX41-202ENST00000503078 MICU3Q86XE3 530 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 TMEM87BQ96K49 555 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 GNL3Q9BVP2 549 aaKnown RBP eCLIP28.17■■■□□ 2.1
DDX41-202ENST00000503078 PLA2G12BQ9BX93 195 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 ATRNO75882 1429 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 ECM29Q5VYK3 1845 aa28.17■■■□□ 2.1
DDX41-202ENST00000503078 ZBTB43O43298 467 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 CSF1RP07333 972 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 GOLGA8FQ08AF8 430 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 GOLGA8DPQ0D2H9 430 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 SLC9C2Q5TAH2 1124 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 TMEM139Q8IV31 216 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 TAOK2Q9UL54 1235 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 TADA3O75528 432 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 PCCAP05165 728 aaPredicted RBP28.16■■■□□ 2.1
DDX41-202ENST00000503078 NTRK3Q16288 839 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 ZCRB1Q8TBF4 217 aaKnown RBP28.16■■■□□ 2.1
DDX41-202ENST00000503078 SENP2Q9HC62 589 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 PARP3Q9Y6F1 533 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 RIC1Q4ADV7 1423 aa28.16■■■□□ 2.1
DDX41-202ENST00000503078 ZRANB2O95218 330 aaKnown RBP eCLIP28.15■■■□□ 2.1
DDX41-202ENST00000503078 TRIM28Q13263 835 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms