RNA–Protein interactions for RNA: ENST00000502254.5

PTPN20-212, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-212ENST00000502254 SRP68Q9UHB9 627 aaKnown RBP6.96□□□□□ -1.3
PTPN20-212ENST00000502254 COL15A1P39059 1388 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 ATP10DQ9P241 1426 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 ERVV-1B6SEH8 477 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 CAMTA2O94983 1202 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 GNAI2P04899 355 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 RFC4P35249 363 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 AAMPQ13685 434 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 GCKRQ14397 625 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 HSP90AB3PQ58FF7 597 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 TRAPPC3LQ5T215 181 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 USPL1Q5W0Q7 1092 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 BICDL1Q6ZP65 573 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 DEFB132Q7Z7B7 95 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 AMIGO3Q86WK7 504 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 CWC25Q9NXE8 425 aaPredicted RBP6.95□□□□□ -1.3
PTPN20-212ENST00000502254 TFCP2L1Q9NZI6 479 aa6.95□□□□□ -1.3
PTPN20-212ENST00000502254 LRRFIP2Q9Y608 721 aaKnown RBP6.95□□□□□ -1.3
PTPN20-212ENST00000502254 SBF2Q86WG5 1849 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 PXDNLA1KZ92 1463 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 GRM8O00222 908 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 MYCP01106 439 aaPredicted RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 IGHDP01880 384 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 NBPF7P0C2Y1 421 aaPredicted RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 HMGB2P26583 209 aaKnown RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 DHX9Q08211 1270 aaKnown RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 ZNF827Q17R98 1081 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 CC2D2BQ6DHV5 1058 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 UBE3BQ7Z3V4 1068 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 SUCLG2Q96I99 432 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 CAMKK2Q96RR4 588 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 ISCA1Q9BUE6 129 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 RWDD1Q9H446 243 aaPredicted RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 OSBPL3Q9H4L5 887 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 CXXC1Q9P0U4 656 aaPredicted RBP6.94□□□□□ -1.3
PTPN20-212ENST00000502254 MTMR7Q9Y216 660 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 ZNF652Q9Y2D9 606 aa6.94□□□□□ -1.3
PTPN20-212ENST00000502254 TMEM229AB2RXF0 380 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 WNT7AO00755 349 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 WEE1P30291 646 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 RAB15P59190 212 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 CEP85Q6P2H3 762 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 NLRP10Q86W26 655 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 ANKRD44Q8N8A2 993 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 CCDC191Q8NCU4 936 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 FAM89AQ96GI7 184 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 STK32BQ9NY57 414 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 NARFQ9UHQ1 456 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 HDAC5Q9UQL6 1122 aa6.93□□□□□ -1.3
PTPN20-212ENST00000502254 NIP7Q9Y221 180 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPN20-212ENST00000502254 RBM19Q9Y4C8 960 aaKnown RBP6.93□□□□□ -1.3
PTPN20-212ENST00000502254 H7C1W4 665 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 PRMT3O60678 531 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 LILRA1O75019 489 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 ADH1CP00326 375 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 PCCAP05165 728 aaPredicted RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 SCNN1DP51172 638 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 ATP8B2P98198 1209 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 TRIM28Q13263 835 aaKnown RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 NR5A1Q13285 461 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 ARID5BQ14865 1188 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 SUSD4Q5VX71 490 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 TBC1D9BQ66K14 1250 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 CLEC4GQ6UXB4 293 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 CENPQQ7L2Z9 268 aaPredicted RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 SIRT2Q8IXJ6 389 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 RPAP2Q8IXW5 612 aaPredicted RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 ZNF34Q8IZ26 560 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 SYNE4Q8N205 404 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 UTP14AQ9BVJ6 771 aaKnown RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 BCL11AQ9H165 835 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 BICC1Q9H694 974 aaKnown RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 TMPRSS4Q9NRS4 437 aa6.92□□□□□ -1.3
PTPN20-212ENST00000502254 TRMT112Q9UI30 125 aaKnown RBP6.92□□□□□ -1.3
PTPN20-212ENST00000502254 CICQ96RK0 1608 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 LY75O60449 1722 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 C4BP0C0L5 1744 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 PNMA6EA0A0J9YXQ4 647 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 NPHP1O15259 732 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 HMMRO75330 724 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 FSHRP23945 695 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 GTF2E1P29083 439 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 SLC19A1P41440 591 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 HDAC1Q13547 482 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 PARP10Q53GL7 1025 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 EPHA10Q5JZY3 1008 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 PPP1R26Q5T8A7 1209 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 PPP1R42Q7Z4L9 355 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 COL23A1Q86Y22 540 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 ZBTB38Q8NAP3 1195 aaPredicted RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 PRIMPOLQ96LW4 560 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 SETDB2Q96T68 719 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 ZNF358Q9NW07 568 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 CHMP3Q9Y3E7 222 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 TLL2Q9Y6L7 1015 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 UTYO14607 1347 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 UBN2Q6ZU65 1347 aa6.91□□□□□ -1.3
PTPN20-212ENST00000502254 USP42Q9H9J4 1324 aaKnown RBP6.91□□□□□ -1.3
PTPN20-212ENST00000502254 ZNF831Q5JPB2 1677 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms