RNA–Protein interactions for RNA: ENST00000500869.6

LYSMD3-203, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 3,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-203ENST00000500869 ME1P48163 572 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 FGD1P98174 961 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 IFIT5Q13325 482 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 KIF6Q6ZMV9 814 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 TBC1D10CQ8IV04 446 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 AOPEPQ8N6M6 819 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 DDX17Q92841 729 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 FAM217BQ9NTX9 383 aaPredicted RBP8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF213O14771 459 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 CUTAO60888 179 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 PFKFB1P16118 471 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 ERO1AQ96HE7 468 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 ZBTB3Q9H5J0 574 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 LY9Q9HBG7 655 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 OGFRQ9NZT2 677 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 CHMP3Q9Y3E7 222 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF202O95125 648 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 STK38Q15208 465 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 APOA5Q6Q788 366 aa8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF579Q8NAF0 562 aaKnown RBP8.37□□□□□ -1.07
LYSMD3-203ENST00000500869 PHLPP2Q6ZVD8 1323 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 RGL2O15211 777 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 CCP110O43303 1012 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 FMNL1O95466 1100 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 MDM2Q00987 491 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 DPCR1Q3MIW9 517 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 CYB5R4Q7L1T6 521 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF34Q8IZ26 560 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 MPNDQ8N594 471 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 JMYQ8N9B5 988 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 CCDC112Q8NEF3 446 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 WDHD1O75717 1129 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 CYP19A1P11511 503 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 SKILP12757 684 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 STRBPQ96SI9 672 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 GPHNQ9NQX3 736 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 DDX41Q9UJV9 622 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 BECN2A8MW95 431 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 PDE8AO60658 829 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 PDE8BO95263 885 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 SLC3A2P08195 630 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 IFNAR1P17181 557 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 TBX2Q13207 712 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 E4F1Q66K89 784 aaPredicted RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 ARMCX5Q6P1M9 558 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 RALYLQ86SE5 291 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 DRC7Q8IY82 874 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 STAG1Q8WVM7 1258 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 CNNM2Q9H8M5 875 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 PIH1D3Q9NQM4 214 aaKnown RBP8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 TMOD3Q9NYL9 352 aa8.36□□□□□ -1.07
LYSMD3-203ENST00000500869 ANKRD18BA2A2Z9 1011 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TPM4P67936 248 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PLCB2Q00722 1185 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PPP4R3BQ5MIZ7 849 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 SHC4Q6S5L8 630 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 SPATA20Q8TB22 786 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 ANAPC4Q9UJX5 808 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TBC1D2BQ9UPU7 963 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 MYH13Q9UKX3 1938 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 A0A1B0GVL5 298 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 USP27XA6NNY8 438 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 CBFA2T2O43439 604 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 STARD3NLO95772 234 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PDE6AP16499 860 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 SARSP49591 514 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 GABPB1Q06547 395 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TOM1L2Q6ZVM7 507 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 CREBRFQ8IUR6 639 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TRIML1Q8N9V2 468 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 ZNF397Q8NF99 534 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 LPIN2Q92539 896 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 WASF1Q92558 559 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 C16orf45Q96MC5 204 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PRDM11Q9NQV5 511 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 TNRC6CQ9HCJ0 1690 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 RANBP6O60518 1105 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 GNAT2P19087 354 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 ITGA6P23229 1130 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 IL6STP40189 918 aaPredicted RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PPP2R5BQ15173 497 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PUM3Q15397 648 aaKnown RBP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PTPN14Q15678 1187 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 KRT40Q6A162 431 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 VPS37DQ86XT2 251 aa8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.35□□□□□ -1.07
LYSMD3-203ENST00000500869 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 METAP2P50579 478 aaKnown RBP eCLIP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 PIGBQ92521 554 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 TSC1Q92574 1164 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 PPP1R13BQ96KQ4 1090 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 XPO4Q9C0E2 1151 aaKnown RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 FOXP1Q9H334 677 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 EPB41L4AQ9HCS5 686 aaPredicted RBP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 CDC27P30260 824 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 FKBP4Q02790 459 aaKnown RBP eCLIP8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 ARID5BQ14865 1188 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 VSTM4Q8IW00 320 aa8.34□□□□□ -1.07
LYSMD3-203ENST00000500869 ALG1Q9BT22 464 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms