RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	KAZALD1	Q96I82	304 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	LRCH3	Q96II8	777 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	PUS3	Q9BZE2	481 aa	Known RBP	13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	CD209	Q9NNX6	404 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	MYOZ2	Q9NPC6	264 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	PNMA3	Q9UL41	463 aa		13.29	□□□□□ -0.28
CDK11A-222	ENST00000498810	BCAR3	O75815	825 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	EGFR	P00533	1210 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	HIRA	P54198	1017 aa	Predicted RBP	13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	FMR1	Q06787	632 aa	Known RBP eCLIP	13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	UBE4A	Q14139	1066 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	DEFB115	Q30KQ5	88 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	CAVIN4	Q5BKX8	364 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	DACT2	Q5SW24	774 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	PADI6	Q6TGC4	694 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	ATF7IP	Q6VMQ6	1270 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	KIAA0825	Q8IV33	1275 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	KLHDC4	Q8TBB5	520 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	AIDA	Q96BJ3	306 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	MXD3	Q9BW11	206 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	SIL1	Q9H173	461 aa		13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	LRRFIP2	Q9Y608	721 aa	Known RBP	13.28	□□□□□ -0.28
CDK11A-222	ENST00000498810	ADM5	C9JUS6	153 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810		F8W031	263 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	TRIM27	P14373	513 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	ECE1	P42892	770 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	ZNF280A	P59817	542 aa	Predicted RBP	13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	SCARF1	Q14162	830 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	LRRC24	Q50LG9	513 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	ANGEL2	Q5VTE6	544 aa	Known RBP	13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	NUDT18	Q6ZVK8	323 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	JMY	Q8N9B5	988 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	MEIS3	Q99687	375 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	TSR3	Q9UJK0	312 aa	Known RBP	13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	JAG2	Q9Y219	1238 aa		13.27	□□□□□ -0.29
CDK11A-222	ENST00000498810	SASH1	O94885	1247 aa		13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	IFIT1	P09914	478 aa	Known RBP	13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	SLC5A1	P13866	664 aa		13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	HIBADH	P31937	336 aa	Known RBP	13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	GYG1	P46976	350 aa		13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	RBM5	P52756	815 aa	Known RBP eCLIP	13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	PTGDR	Q13258	359 aa		13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	PUM3	Q15397	648 aa	Known RBP	13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	C15orf52	Q6ZUT6	534 aa	Known RBP	13.26	□□□□□ -0.29
CDK11A-222	ENST00000498810	RASSF10	A6NK89	507 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	MYO1B	O43795	1136 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	HSPA1A	P0DMV8	641 aa	Known RBP	13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	HSPA1B	P0DMV9	641 aa	Known RBP	13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	VEGFB	P49765	207 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	MMP14	P50281	582 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	CHAF1A	Q13111	956 aa	Predicted RBP	13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	INTS3	Q68E01	1043 aa	Known RBP	13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	ITPRIP	Q8IWB1	547 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	C2orf69	Q8N8R5	385 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	BEGAIN	Q9BUH8	593 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	PGAP2	Q9UHJ9	254 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	HPS5	Q9UPZ3	1129 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	RIPOR2	Q9Y4F9	1068 aa		13.25	□□□□□ -0.29
CDK11A-222	ENST00000498810	ASTN2	O75129	1339 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	PITPNM2	Q9BZ72	1349 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	WDR33	Q9C0J8	1336 aa	Known RBP	13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	EYA2	O00167	538 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	PDE8B	O95263	885 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	IL1R1	P14778	569 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	NF2	P35240	595 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	TTLL12	Q14166	644 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	DLGAP5	Q15398	846 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	MFSD14B	Q5SR56	506 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	CAPNS2	Q96L46	248 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	GML	Q99445	158 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	TLL2	Q9Y6L7	1015 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	PAPPA2	Q9BXP8	1791 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	THSD7B	Q9C0I4	1608 aa		13.24	□□□□□ -0.29
CDK11A-222	ENST00000498810	TESPA1	A2RU30	521 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	SRGAP3	O43295	1099 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	GNAI2	P04899	355 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	HUNK	P57058	714 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	CST9	Q5W186	159 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	CYP4F22	Q6NT55	531 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	APOBEC3F	Q8IUX4	373 aa	Known RBP	13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	CDCA5	Q96FF9	252 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	GBA2	Q9HCG7	927 aa	Predicted RBP	13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	CEP126	Q9P2H0	1117 aa		13.23	□□□□□ -0.29
CDK11A-222	ENST00000498810	IRS2	Q9Y4H2	1338 aa		13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	PTPN12	Q05209	780 aa	Known RBP	13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	ATP2B3	Q16720	1220 aa		13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	NBPF9	Q3BBW0	867 aa		13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	DZIP1L	Q8IYY4	767 aa	Known RBP	13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	TMEM57	Q8N5G2	664 aa		13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	TNN	Q9UQP3	1299 aa		13.22	□□□□□ -0.29
CDK11A-222	ENST00000498810	WNT10B	O00744	389 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	CIAO1	O76071	339 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	IL15	P40933	162 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	FKBP1A	P62942	108 aa	Known RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	OS9	Q13438	667 aa	Predicted RBP	13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	SAPCD2	Q86UD0	394 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	TBC1D22A	Q8WUA7	517 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	LPIN2	Q92539	896 aa		13.21	□□□□□ -0.29
CDK11A-222	ENST00000498810	FAM84B	Q96KN1	310 aa	Predicted RBP	13.21	□□□□□ -0.29

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms