RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 FMNL1O95466 1100 aaPredicted RBP6.63□□□□□ -1.35
CSTF1-207ENST00000498689 CCL15Q16663 113 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 C1orf141Q5JVX7 400 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 CLEC4GQ6UXB4 293 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 KCNH6Q9H252 994 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 ZNF576Q9H609 170 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 FAM86C1Q9NVL1 165 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 CPA4Q9UI42 421 aa6.63□□□□□ -1.35
CSTF1-207ENST00000498689 CYSRT1A8MQ03 144 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 ZIC2O95409 532 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-207ENST00000498689 DNAJB2P25686 324 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 ID4P47928 161 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 EIF4A2Q14240 407 aaKnown RBP6.62□□□□□ -1.35
CSTF1-207ENST00000498689 C17orf99Q6UX52 265 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 AEBP1Q8IUX7 1158 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 SP8Q8IXZ3 490 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 ANKLE1Q8NAG6 615 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 OPTNQ96CV9 577 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 GMLQ99445 158 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 GAS2L1Q99501 681 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-207ENST00000498689 LBHD1Q9BQE6 289 aaPredicted RBP6.62□□□□□ -1.35
CSTF1-207ENST00000498689 ELP3Q9H9T3 547 aa6.62□□□□□ -1.35
CSTF1-207ENST00000498689 CEP250Q9BV73 2442 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 HEG1Q9ULI3 1381 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 SASH1O94885 1247 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 IGFBP4P22692 258 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 PBX2P40425 430 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 WASHC4Q2M389 1173 aa6.61□□□□□ -1.35
CSTF1-207ENST00000498689 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.61□□□□□ -1.35
CSTF1-207ENST00000498689 SOWAHBA6NEL2 793 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 WNT10BO00744 389 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 TRIM32Q13049 653 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 RSBN1LQ6PCB5 846 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-207ENST00000498689 MICALL1Q8N3F8 863 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 TMX4Q9H1E5 349 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-207ENST00000498689 POLLQ9UGP5 575 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 ZNF652Q9Y2D9 606 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 PTPRFP10586 1907 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 COL1A1P02452 1464 aaPredicted RBP6.6□□□□□ -1.35
CSTF1-207ENST00000498689 SPEF2Q9C093 1822 aa6.6□□□□□ -1.35
CSTF1-207ENST00000498689 ARAP2Q8WZ64 1704 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 UBN2Q6ZU65 1347 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 USP9XQ93008 2570 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-207ENST00000498689 BTBD19C9JJ37 291 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 RNMTO43148 476 aaKnown RBP6.59□□□□□ -1.35
CSTF1-207ENST00000498689 USP2O75604 605 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-207ENST00000498689 PPP1R37O75864 691 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 USP17L8P0C7I0 530 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 U2AF1L5P0DN76 240 aaPredicted RBP6.59□□□□□ -1.35
CSTF1-207ENST00000498689 COL6A1P12109 1028 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 HOXD10P28358 340 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 FLT3LGP49771 235 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 U2AF1Q01081 240 aaKnown RBP eCLIP6.59□□□□□ -1.35
CSTF1-207ENST00000498689 TCF15Q12870 199 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 CSPP1Q1MSJ5 1256 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 HFE2Q6ZVN8 426 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 MXD3Q9BW11 206 aa6.59□□□□□ -1.35
CSTF1-207ENST00000498689 EPHB4P54760 987 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 AMOTQ4VCS5 1084 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 NPM2Q86SE8 214 aaKnown RBP6.58□□□□□ -1.36
CSTF1-207ENST00000498689 AGBL3Q8NEM8 1001 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 BADQ92934 168 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 TIFAQ96CG3 184 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 HELZ2Q9BYK8 2649 aaKnown RBP6.58□□□□□ -1.36
CSTF1-207ENST00000498689 WDFY3Q8IZQ1 3526 aa6.58□□□□□ -1.36
CSTF1-207ENST00000498689 EP300Q09472 2414 aaPredicted RBP6.57□□□□□ -1.36
CSTF1-207ENST00000498689 ERC2O15083 957 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 CAPN2P17655 700 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 GPTP24298 496 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 ST3GAL2Q16842 350 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 NBPF12Q5TAG4 269 aaPredicted RBP6.57□□□□□ -1.36
CSTF1-207ENST00000498689 SUSD4Q5VX71 490 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 ASCL5Q7RTU5 278 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 NYXQ9GZU5 481 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 PLA2G2EQ9NZK7 142 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 OGDHLQ9ULD0 1010 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 USP16Q9Y5T5 823 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 LOC400499M0QZD8 3231 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 ATRNL1Q5VV63 1379 aa6.57□□□□□ -1.36
CSTF1-207ENST00000498689 SMG1Q96Q15 3661 aaKnown RBP6.56□□□□□ -1.36
CSTF1-207ENST00000498689 TEP1Q99973 2627 aaKnown RBP6.56□□□□□ -1.36
CSTF1-207ENST00000498689 GRXCR1A8MXD5 290 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 C6orf229H3BNL8 230 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 GTF2A2P52657 109 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 GPSM2P81274 684 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 AAK1Q2M2I8 961 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 NBPF10Q6P3W6 841 aaKnown RBP6.56□□□□□ -1.36
CSTF1-207ENST00000498689 ADGRD1Q6QNK2 874 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 PXYLP1Q8TE99 480 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 RNPC3Q96LT9 517 aaKnown RBP6.56□□□□□ -1.36
CSTF1-207ENST00000498689 DEFB129Q9H1M3 183 aa6.56□□□□□ -1.36
CSTF1-207ENST00000498689 DSPP15924 2871 aaKnown RBP6.56□□□□□ -1.36
CSTF1-207ENST00000498689 COL4A4P53420 1690 aaPredicted RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 ARHGAP33O14559 1287 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 KCNQ3O43525 872 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 PPP1R12BO60237 982 aaPredicted RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 BBOX1O75936 387 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 NTSR2O95665 410 aa6.55□□□□□ -1.36
CSTF1-207ENST00000498689 SKIV2LQ15477 1246 aaKnown RBP6.55□□□□□ -1.36
CSTF1-207ENST00000498689 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms