RNA–Protein interactions for RNA: ENST00000498530.5

PMPCB-208, Transcript of peptidase, mitochondrial processing beta subunit, humanhuman

TSL 2

Gene PMPCB, Length 1,161 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCB-208ENST00000498530 SEPT6Q14141 434 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 LLGL2Q6P1M3 1020 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 SULF2Q8IWU5 870 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 RPUSD2Q8IZ73 545 aaKnown RBP8.53□□□□□ -1.04
PMPCB-208ENST00000498530 SOX13Q9UN79 622 aa8.53□□□□□ -1.04
PMPCB-208ENST00000498530 ZBTB42B2RXF5 422 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 CD33P20138 364 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 RPL6Q02878 288 aaKnown RBP8.52□□□□□ -1.05
PMPCB-208ENST00000498530 CLCQ05315 142 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 PCDH1Q08174 1060 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 SQSTM1Q13501 440 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 RIPOR1Q6ZS17 1223 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 C16orf86Q6ZW13 317 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 THAP3Q8WTV1 239 aaPredicted RBP8.52□□□□□ -1.05
PMPCB-208ENST00000498530 POP1Q99575 1024 aaKnown RBP8.52□□□□□ -1.05
PMPCB-208ENST00000498530 EMILIN2Q9BXX0 1053 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 RBSNQ9H1K0 784 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 KLHL42Q9P2K6 505 aa8.52□□□□□ -1.05
PMPCB-208ENST00000498530 MEIS3P2A8K0S8 358 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 SMNDC1O75940 238 aaKnown RBP eCLIP8.51□□□□□ -1.05
PMPCB-208ENST00000498530 TRIM37O94972 964 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 GHRHP01286 108 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 ZNF252P-AS1Q0IIN9 211 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 KANK3Q6NY19 840 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 GK5Q6ZS86 529 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
PMPCB-208ENST00000498530 SYNPOQ8N3V7 929 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 ST13P5Q8NFI4 369 aaPredicted RBP8.51□□□□□ -1.05
PMPCB-208ENST00000498530 JARID2Q92833 1246 aaPredicted RBP8.51□□□□□ -1.05
PMPCB-208ENST00000498530 ABHD17AQ96GS6 310 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 TNKS2Q9H2K2 1166 aa8.51□□□□□ -1.05
PMPCB-208ENST00000498530 ARNTP27540 789 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 DBN1Q16643 649 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 MTERF2Q49AM1 385 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 FBXW10Q5XX13 1052 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 NOL8Q76FK4 1167 aaKnown RBP8.5□□□□□ -1.05
PMPCB-208ENST00000498530 VN1R5Q7Z5H4 357 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 TAB3Q8N5C8 712 aaPredicted RBP8.5□□□□□ -1.05
PMPCB-208ENST00000498530 STK35Q8TDR2 534 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 ADAM19Q9H013 955 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 ST7Q9NRC1 585 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 TYW1Q9NV66 732 aaKnown RBP8.5□□□□□ -1.05
PMPCB-208ENST00000498530 CACNA2D2Q9NY47 1150 aa8.5□□□□□ -1.05
PMPCB-208ENST00000498530 POLR3KQ9Y2Y1 108 aaPredicted RBP8.5□□□□□ -1.05
PMPCB-208ENST00000498530 MAN1A2O60476 641 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 GJB6O95452 261 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 VIL1P09327 827 aaKnown RBP8.49□□□□□ -1.05
PMPCB-208ENST00000498530 GYS2P54840 703 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 AMPD3Q01432 767 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 KRT76Q01546 638 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 PTSQ03393 145 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 ZNF423Q2M1K9 1284 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 TM9SF2Q99805 663 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 PRR36Q9H6K5 1346 aa8.49□□□□□ -1.05
PMPCB-208ENST00000498530 J3QW42 95 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
PMPCB-208ENST00000498530 FGFR3P22607 806 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 LRRFIP1Q32MZ4 808 aaKnown RBP8.48□□□□□ -1.05
PMPCB-208ENST00000498530 CCDC181Q5TID7 509 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 LARP1BQ659C4 914 aaKnown RBP8.48□□□□□ -1.05
PMPCB-208ENST00000498530 PDZD3Q86UT5 571 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 ZNF837Q96EG3 531 aaPredicted RBP8.48□□□□□ -1.05
PMPCB-208ENST00000498530 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
PMPCB-208ENST00000498530 ADAMTS8Q9UP79 889 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 PHF24Q9UPV7 400 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 LEMD3Q9Y2U8 911 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 PCDHB14Q9Y5E9 798 aa8.48□□□□□ -1.05
PMPCB-208ENST00000498530 ESRRAP11474 423 aaPredicted RBP8.47□□□□□ -1.05
PMPCB-208ENST00000498530 PTPRAP18433 802 aa8.47□□□□□ -1.05
PMPCB-208ENST00000498530 ZNF157P51786 506 aaPredicted RBP8.47□□□□□ -1.05
PMPCB-208ENST00000498530 MLLT1Q03111 559 aaPredicted RBP8.47□□□□□ -1.05
PMPCB-208ENST00000498530 PLEKHG6Q3KR16 790 aa8.47□□□□□ -1.05
PMPCB-208ENST00000498530 ADAMTSL4Q6UY14 1074 aa8.47□□□□□ -1.05
PMPCB-208ENST00000498530 DDX54Q8TDD1 881 aaKnown RBP8.47□□□□□ -1.05
PMPCB-208ENST00000498530 A0A1W2PQH9 124 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 SIN3BO75182 1162 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 EIF2AK2P19525 551 aaKnown RBP8.46□□□□□ -1.06
PMPCB-208ENST00000498530 GUCY2CP25092 1073 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 MASP1P48740 699 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 AP3B2Q13367 1082 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 TCEA2Q15560 299 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 ZNF468Q5VIY5 522 aaPredicted RBP8.46□□□□□ -1.06
PMPCB-208ENST00000498530 CEP135Q66GS9 1140 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 GRIN3AQ8TCU5 1115 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 IRF2BPLQ9H1B7 796 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 DDX56Q9NY93 547 aaKnown RBP8.46□□□□□ -1.06
PMPCB-208ENST00000498530 PLAAQ9Y263 795 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 SLC12A7Q9Y666 1083 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 PTCH2Q9Y6C5 1203 aa8.46□□□□□ -1.06
PMPCB-208ENST00000498530 UPK3BL1B0FP48 263 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 UPK3BL2E5RIL1 263 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 EIF4EBP3O60516 100 aaPredicted RBP8.45□□□□□ -1.06
PMPCB-208ENST00000498530 TKFCQ3LXA3 575 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 HFE2Q6ZVN8 426 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 FAM178BQ8IXR5 827 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 CCDC155Q8N6L0 562 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 STAG1Q8WVM7 1258 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 TMEM40Q8WWA1 233 aa8.45□□□□□ -1.06
PMPCB-208ENST00000498530 TNFRSF25Q93038 417 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms