RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 SHISA4Q96DD7 197 aa17.56■□□□□ 0.4
CCDC58-207ENST00000498466 KAZALD1Q96I82 304 aa17.56■□□□□ 0.4
CCDC58-207ENST00000498466 ZNF341Q9BYN7 854 aa17.56■□□□□ 0.4
CCDC58-207ENST00000498466 SRRDQ9UH36 339 aa17.56■□□□□ 0.4
CCDC58-207ENST00000498466 RANBP2P49792 3224 aaKnown RBP17.56■□□□□ 0.4
CCDC58-207ENST00000498466 NBPF7P0C2Y1 421 aaPredicted RBP17.55■□□□□ 0.4
CCDC58-207ENST00000498466 CTGFP29279 349 aa17.55■□□□□ 0.4
CCDC58-207ENST00000498466 LRRC24Q50LG9 513 aa17.55■□□□□ 0.4
CCDC58-207ENST00000498466 NKX2-3Q8TAU0 364 aa17.55■□□□□ 0.4
CCDC58-207ENST00000498466 TRIM47Q96LD4 638 aa17.55■□□□□ 0.4
CCDC58-207ENST00000498466 MRIQ9BWK5 157 aa17.55■□□□□ 0.4
CCDC58-207ENST00000498466 PDHXO00330 501 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 PDE8BO95263 885 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 OSBPP22059 807 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 INPP5BP32019 993 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 GRK4P32298 578 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 BCAMP50895 628 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 ANKRD23Q86SG2 305 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 BICC1Q9H694 974 aaKnown RBP17.54■□□□□ 0.4
CCDC58-207ENST00000498466 RBM27Q9P2N5 1060 aaKnown RBP17.54■□□□□ 0.4
CCDC58-207ENST00000498466 SUGT1Q9Y2Z0 365 aa17.54■□□□□ 0.4
CCDC58-207ENST00000498466 RPAP1Q9BWH6 1393 aaPredicted RBP17.53■□□□□ 0.4
CCDC58-207ENST00000498466 MYPNQ86TC9 1320 aa17.53■□□□□ 0.4
CCDC58-207ENST00000498466 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
CCDC58-207ENST00000498466 BIN2Q9UBW5 565 aaPredicted RBP17.53■□□□□ 0.4
CCDC58-207ENST00000498466 CCL5P13501 91 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 GJA8P48165 433 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 HHIPL2Q6UWX4 724 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 VGLL2Q8N8G2 317 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 HTATIP2Q9BUP3 242 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 RNF208Q9H0X6 261 aa17.52■□□□□ 0.4
CCDC58-207ENST00000498466 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
CCDC58-207ENST00000498466 RNF216Q9NWF9 866 aaPredicted RBP17.52■□□□□ 0.4
CCDC58-207ENST00000498466 GJB1P08034 283 aa17.51■□□□□ 0.39
CCDC58-207ENST00000498466 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
CCDC58-207ENST00000498466 UBXN2AP68543 259 aa17.51■□□□□ 0.39
CCDC58-207ENST00000498466 TCP10Q12799 353 aa17.51■□□□□ 0.39
CCDC58-207ENST00000498466 RABL6Q3YEC7 729 aaPredicted RBP17.51■□□□□ 0.39
CCDC58-207ENST00000498466 FAM151AQ8WW52 585 aa17.51■□□□□ 0.39
CCDC58-207ENST00000498466 KCNH4Q9UQ05 1017 aa17.51■□□□□ 0.39
CCDC58-207ENST00000498466 UTYO14607 1347 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 ADGRA2Q96PE1 1338 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 ZEB1P37275 1124 aaPredicted RBP17.5■□□□□ 0.39
CCDC58-207ENST00000498466 PUM3Q15397 648 aaKnown RBP17.5■□□□□ 0.39
CCDC58-207ENST00000498466 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 PARK7Q99497 189 aaKnown RBP17.5■□□□□ 0.39
CCDC58-207ENST00000498466 MRS2Q9HD23 443 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 ZNF112Q9UJU3 913 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 TRIOBPQ9H2D6 2365 aa17.5■□□□□ 0.39
CCDC58-207ENST00000498466 FCGRTP55899 365 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 PRKCZQ05513 592 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 UBE2Q1Q7Z7E8 422 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 ANKRD44Q8N8A2 993 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 WDR66Q8TBY9 1149 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 NR2E3Q9Y5X4 410 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 CEP290O15078 2479 aa17.49■□□□□ 0.39
CCDC58-207ENST00000498466 KIF16BQ96L93 1317 aa17.48■□□□□ 0.39
CCDC58-207ENST00000498466 MOGSQ13724 837 aa17.48■□□□□ 0.39
CCDC58-207ENST00000498466 SLAIN1Q8ND83 568 aa17.48■□□□□ 0.39
CCDC58-207ENST00000498466 FARP2O94887 1054 aaPredicted RBP17.47■□□□□ 0.39
CCDC58-207ENST00000498466 CYP2C8P10632 490 aa17.47■□□□□ 0.39
CCDC58-207ENST00000498466 FGFR2P21802 821 aa17.47■□□□□ 0.39
CCDC58-207ENST00000498466 NFIAQ12857 509 aa17.47■□□□□ 0.39
CCDC58-207ENST00000498466 NOL9Q5SY16 702 aaKnown RBP17.47■□□□□ 0.39
CCDC58-207ENST00000498466 CDC42EP5Q6NZY7 148 aa17.47■□□□□ 0.39
CCDC58-207ENST00000498466 U2AF1L4Q8WU68 220 aaKnown RBP17.47■□□□□ 0.39
CCDC58-207ENST00000498466 DAGLAQ9Y4D2 1042 aa17.47■□□□□ 0.39
CCDC58-207ENST00000498466 CXCL11O14625 94 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 BCRP11274 1271 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 SLC5A1P13866 664 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 DIXDC1Q155Q3 683 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 GPAT2Q6NUI2 795 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 UNC93B1Q9H1C4 597 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 GABRQQ9UN88 632 aa17.46■□□□□ 0.39
CCDC58-207ENST00000498466 LPIN2Q92539 896 aa17.45■□□□□ 0.38
CCDC58-207ENST00000498466 PRO3102Q9H379 93 aa17.45■□□□□ 0.38
CCDC58-207ENST00000498466 USP40Q9NVE5 1235 aa17.45■□□□□ 0.38
CCDC58-207ENST00000498466 FAM198AQ9UFP1 575 aa17.45■□□□□ 0.38
CCDC58-207ENST00000498466 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
CCDC58-207ENST00000498466 ADCY3O60266 1144 aa17.44■□□□□ 0.38
CCDC58-207ENST00000498466 SGPL1O95470 568 aa17.44■□□□□ 0.38
CCDC58-207ENST00000498466 PRDX5P30044 214 aa17.44■□□□□ 0.38
CCDC58-207ENST00000498466 FASTKD5Q7L8L6 764 aaKnown RBP17.44■□□□□ 0.38
CCDC58-207ENST00000498466 PICK1Q9NRD5 415 aa17.44■□□□□ 0.38
CCDC58-207ENST00000498466 ZHX2Q9Y6X8 837 aa17.44■□□□□ 0.38
CCDC58-207ENST00000498466 LAMA3Q16787 3333 aa17.43■□□□□ 0.38
CCDC58-207ENST00000498466 EYA2O00167 538 aa17.43■□□□□ 0.38
CCDC58-207ENST00000498466 EVI5O60447 810 aa17.43■□□□□ 0.38
CCDC58-207ENST00000498466 LDHBP07195 334 aaKnown RBP17.43■□□□□ 0.38
CCDC58-207ENST00000498466 GADL1Q6ZQY3 521 aa17.43■□□□□ 0.38
CCDC58-207ENST00000498466 COL6A3P12111 3177 aa17.43■□□□□ 0.38
CCDC58-207ENST00000498466 A0A0G2JLL6 359 aaPredicted RBP17.42■□□□□ 0.38
CCDC58-207ENST00000498466 TFRCP02786 760 aaKnown RBP17.42■□□□□ 0.38
CCDC58-207ENST00000498466 INHAP05111 366 aa17.42■□□□□ 0.38
CCDC58-207ENST00000498466 ELNP15502 786 aa17.42■□□□□ 0.38
CCDC58-207ENST00000498466 FLT3LGP49771 235 aa17.42■□□□□ 0.38
CCDC58-207ENST00000498466 PRRT2Q7Z6L0 340 aaPredicted RBP17.42■□□□□ 0.38
CCDC58-207ENST00000498466 ZFPM1Q8IX07 1006 aa17.42■□□□□ 0.38
CCDC58-207ENST00000498466 SCYL3Q8IZE3 742 aa17.42■□□□□ 0.38
CCDC58-207ENST00000498466 SLC17A8Q8NDX2 589 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms