RNA–Protein interactions for RNA: ENST00000498091.1

RTN4IP1-203, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2

Gene RTN4IP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-203ENST00000498091 SCAMP3O14828 347 aaKnown RBP4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 BACH1O14867 736 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 NPR3P17342 541 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 PPP2R1AP30153 589 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 XPCQ01831 940 aaPredicted RBP4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 AAMPQ13685 434 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 MRPL58Q14197 206 aaKnown RBP4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 C9orf131Q5VYM1 1079 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 WAPLQ7Z5K2 1190 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 TNS4Q8IZW8 715 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 UBXN4Q92575 508 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 YTHDC1Q96MU7 727 aaKnown RBP4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 SLC26A8Q96RN1 970 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 SLC12A5Q9H2X9 1139 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 SHPRHQ149N8 1683 aa4.89□□□□□ -1.63
RTN4IP1-203ENST00000498091 ELOA3CA0A087WX78 387 aaPredicted RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 ELOA3DA6NLF2 546 aaPredicted RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 TREHO43280 583 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 MAPTP10636 758 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 KCNA6P17658 529 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 BRD2P25440 801 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 TXKP42681 527 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 MAPK8P45983 427 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 HDLBPQ00341 1268 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 SAFB2Q14151 953 aaKnown RBP eCLIP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 ELOA3BQ3SY89 546 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 CC2D1BQ5T0F9 858 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 BICDL1Q6ZP65 573 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 FCHSD1Q86WN1 690 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 NGEFQ8N5V2 710 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 TMEM87AQ8NBN3 555 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 ELOA3Q8NG57 546 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 NUDT16Q96DE0 195 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 XAGE2Q96GT9 111 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 NIFKQ9BYG3 293 aaKnown RBP4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 NEUROD4Q9HD90 331 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 NDFIP2Q9NV92 336 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 KIF1AQ12756 1690 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 USP6P35125 1406 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 SSH2Q76I76 1423 aa4.88□□□□□ -1.63
RTN4IP1-203ENST00000498091 STRCQ7RTU9 1775 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 C9orf172C9J069 976 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 FAM229AH3BQW9 127 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 LDHBP07195 334 aaKnown RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 GDF10P55107 478 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 FGD1P98174 961 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 PLCB3Q01970 1234 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 FMR1Q06787 632 aaKnown RBP eCLIP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 UBAP2LQ14157 1087 aaKnown RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 FOXD4L6Q3SYB3 417 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 CCDC184Q52MB2 194 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 TRAPPC3LQ5T215 181 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 ZNF468Q5VIY5 522 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 ALKBH2Q6NS38 261 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 C16orf46Q6P387 395 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 FOXD4L3Q6VB84 417 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 CITED4Q96RK1 184 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 SAP130Q9H0E3 1048 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 TSPAN10Q9H1Z9 355 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 PARP2Q9UGN5 583 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 SERTAD1Q9UHV2 236 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 TTC21AQ8NDW8 1320 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 PRR36Q9H6K5 1346 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 AATKQ6ZMQ8 1374 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 MST1RQ04912 1400 aa4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 COL3A1P02461 1466 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 CDK12Q9NYV4 1490 aaPredicted RBP4.87□□□□□ -1.63
RTN4IP1-203ENST00000498091 PHRF1Q9P1Y6 1649 aaKnown RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 A0A1W2PNR3 127 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 M0R082 166 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 PPP1R12BO60237 982 aaPredicted RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 SMARCA5O60264 1052 aaPredicted RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 STAU1O95793 577 aaKnown RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 YBX3P16989 372 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 EIF1AXP47813 144 aaKnown RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 SCNN1DP51172 638 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 HNRNPUQ00839 825 aaKnown RBP eCLIP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 FAM182BQ5T319 152 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 MORC1Q86VD1 984 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 ZNF417Q8TAU3 575 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 SPATA32Q96LK8 384 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 CFAP53Q96M91 514 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 DMRTB1Q96MA1 342 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 FAM161BQ96MY7 647 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 ZNF587Q96SQ5 575 aaPredicted RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 DUSP9Q99956 384 aaKnown RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 CCDC87Q9NVE4 849 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 CABP1Q9NZU7 370 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 MARK1Q9P0L2 795 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 USP31Q70CQ4 1352 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 PNPLA6Q8IY17 1366 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 OVOS2A0A0J9YW53 1432 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 OVOS2Q6IE36 1432 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 PIK3C2AO00443 1686 aa4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 RGPD8O14715 1765 aaPredicted RBP4.86□□□□□ -1.63
RTN4IP1-203ENST00000498091 FYB1O15117 783 aa4.85□□□□□ -1.63
RTN4IP1-203ENST00000498091 HYAL3O43820 417 aaPredicted RBP4.85□□□□□ -1.63
RTN4IP1-203ENST00000498091 SORBS3O60504 671 aa4.85□□□□□ -1.63
RTN4IP1-203ENST00000498091 PRPF40AO75400 957 aaKnown RBP4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms