RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 SP3Q02447 781 aa23.11■■□□□ 1.29
PRKCB-209ENST00000498058 NFIAQ12857 509 aa23.11■■□□□ 1.29
PRKCB-209ENST00000498058 MIGA2Q7L4E1 593 aa23.11■■□□□ 1.29
PRKCB-209ENST00000498058 TNNQ9UQP3 1299 aa23.11■■□□□ 1.29
PRKCB-209ENST00000498058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.11■■□□□ 1.29
PRKCB-209ENST00000498058 RPAP1Q9BWH6 1393 aaPredicted RBP23.11■■□□□ 1.29
PRKCB-209ENST00000498058 CENPFP49454 3210 aa23.1■■□□□ 1.29
PRKCB-209ENST00000498058 COPRSQ9NQ92 184 aa23.1■■□□□ 1.29
PRKCB-209ENST00000498058 POTEFA5A3E0 1075 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 IRF6O14896 467 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 INPP5BP32019 993 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 TCP10Q12799 353 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 TAF1CQ15572 869 aaPredicted RBP23.09■■□□□ 1.29
PRKCB-209ENST00000498058 FAM198AQ9UFP1 575 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 AK9Q5TCS8 1911 aa23.09■■□□□ 1.29
PRKCB-209ENST00000498058 MYH2Q9UKX2 1941 aa23.08■■□□□ 1.29
PRKCB-209ENST00000498058 IL15P40933 162 aaPredicted RBP23.08■■□□□ 1.29
PRKCB-209ENST00000498058 INTS3Q68E01 1043 aaKnown RBP23.08■■□□□ 1.29
PRKCB-209ENST00000498058 ERO1BQ86YB8 467 aa23.08■■□□□ 1.29
PRKCB-209ENST00000498058 ZFPM1Q8IX07 1006 aa23.08■■□□□ 1.29
PRKCB-209ENST00000498058 FAM151AQ8WW52 585 aa23.08■■□□□ 1.29
PRKCB-209ENST00000498058 EFCC1Q9HA90 598 aa23.08■■□□□ 1.29
PRKCB-209ENST00000498058 SALL1Q9NSC2 1324 aa23.08■■□□□ 1.28
PRKCB-209ENST00000498058 TIMM10P62072 90 aa23.07■■□□□ 1.28
PRKCB-209ENST00000498058 CCDC102BQ68D86 513 aa23.07■■□□□ 1.28
PRKCB-209ENST00000498058 BTBD19C9JJ37 291 aa23.06■■□□□ 1.28
PRKCB-209ENST00000498058 LDHBP07195 334 aaKnown RBP23.06■■□□□ 1.28
PRKCB-209ENST00000498058 ZNF341Q9BYN7 854 aa23.06■■□□□ 1.28
PRKCB-209ENST00000498058 ZFYVE28Q9HCC9 887 aa23.06■■□□□ 1.28
PRKCB-209ENST00000498058 ZNF112Q9UJU3 913 aa23.06■■□□□ 1.28
PRKCB-209ENST00000498058 KIAA0100Q14667 2235 aaKnown RBP23.06■■□□□ 1.28
PRKCB-209ENST00000498058 PPIL2Q13356 520 aa23.05■■□□□ 1.28
PRKCB-209ENST00000498058 DCAF15Q66K64 600 aa23.05■■□□□ 1.28
PRKCB-209ENST00000498058 USP40Q9NVE5 1235 aa23.05■■□□□ 1.28
PRKCB-209ENST00000498058 DENND2AQ9ULE3 1009 aa23.05■■□□□ 1.28
PRKCB-209ENST00000498058 MKI67P46013 3256 aaKnown RBP23.04■■□□□ 1.28
PRKCB-209ENST00000498058 RBBP6Q7Z6E9 1792 aaKnown RBP23.04■■□□□ 1.28
PRKCB-209ENST00000498058 RASGRF1Q13972 1273 aa23.04■■□□□ 1.28
PRKCB-209ENST00000498058 ARHGAP45Q92619 1136 aa23.04■■□□□ 1.28
PRKCB-209ENST00000498058 ARMC5Q96C12 935 aa23.04■■□□□ 1.28
PRKCB-209ENST00000498058 ARHGAP39Q9C0H5 1083 aa23.04■■□□□ 1.28
PRKCB-209ENST00000498058 GNL3LQ9NVN8 582 aaKnown RBP23.04■■□□□ 1.28
PRKCB-209ENST00000498058 SEMA3EO15041 775 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 ZBTB22O15209 634 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 SLURP2P0DP57 97 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 CETPP11597 493 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 TFCP2Q12800 502 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 HOOK2Q96ED9 719 aa23.03■■□□□ 1.28
PRKCB-209ENST00000498058 ATRNL1Q5VV63 1379 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 TLR2O60603 784 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 BCAR3O75815 825 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 PPATQ06203 517 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 SNAPC2Q13487 334 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 MTX1Q13505 466 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 MOGSQ13724 837 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 PRPF38BQ5VTL8 546 aaKnown RBP23.02■■□□□ 1.28
PRKCB-209ENST00000498058 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.02■■□□□ 1.28
PRKCB-209ENST00000498058 PTCH2Q9Y6C5 1203 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 GAKO14976 1311 aa23.02■■□□□ 1.28
PRKCB-209ENST00000498058 RFX7Q2KHR2 1363 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 BRCA2P51587 3418 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 A0A1B0GUL7 405 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 SRGAP3O43295 1099 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 TRIM27P14373 513 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 SH3BP5LQ7L8J4 393 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 XAGE2Q96GT9 111 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 DOCK2Q92608 1830 aa23.01■■□□□ 1.27
PRKCB-209ENST00000498058 ZNF384Q8TF68 577 aa23■■□□□ 1.27
PRKCB-209ENST00000498058 ZCCHC17Q9NP64 241 aaKnown RBP23■■□□□ 1.27
PRKCB-209ENST00000498058 KCNH4Q9UQ05 1017 aa23■■□□□ 1.27
PRKCB-209ENST00000498058 HDAC5Q9UQL6 1122 aa23■■□□□ 1.27
PRKCB-209ENST00000498058 GNAI3P08754 354 aa22.99■■□□□ 1.27
PRKCB-209ENST00000498058 EN2P19622 333 aaPredicted RBP22.99■■□□□ 1.27
PRKCB-209ENST00000498058 CTGFP29279 349 aa22.99■■□□□ 1.27
PRKCB-209ENST00000498058 RGS3P49796 1198 aa22.99■■□□□ 1.27
PRKCB-209ENST00000498058 NOL9Q5SY16 702 aaKnown RBP22.99■■□□□ 1.27
PRKCB-209ENST00000498058 IDI2Q9BXS1 227 aa22.99■■□□□ 1.27
PRKCB-209ENST00000498058 DDX4Q9NQI0 724 aaKnown RBP22.99■■□□□ 1.27
PRKCB-209ENST00000498058 PHF20L1A8MW92 1017 aa22.98■■□□□ 1.27
PRKCB-209ENST00000498058 ZNF333Q96JL9 665 aa22.98■■□□□ 1.27
PRKCB-209ENST00000498058 ABCF2Q9UG63 623 aa22.98■■□□□ 1.27
PRKCB-209ENST00000498058 PNMA6EA0A0J9YXQ4 647 aa22.97■■□□□ 1.27
PRKCB-209ENST00000498058 DDTLA6NHG4 134 aaPredicted RBP22.97■■□□□ 1.27
PRKCB-209ENST00000498058 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
PRKCB-209ENST00000498058 ECM2O94769 699 aaPredicted RBP22.97■■□□□ 1.27
PRKCB-209ENST00000498058 LACTBP83111 547 aaPredicted RBP22.97■■□□□ 1.27
PRKCB-209ENST00000498058 C17orf99Q6UX52 265 aa22.97■■□□□ 1.27
PRKCB-209ENST00000498058 PI16Q6UXB8 463 aa22.97■■□□□ 1.27
PRKCB-209ENST00000498058 CLUAP1Q96AJ1 413 aa22.97■■□□□ 1.27
PRKCB-209ENST00000498058 PDS5AQ29RF7 1337 aaKnown RBP22.97■■□□□ 1.27
PRKCB-209ENST00000498058 ADGRA2Q96PE1 1338 aa22.97■■□□□ 1.27
PRKCB-209ENST00000498058 ATF7IPQ6VMQ6 1270 aa22.96■■□□□ 1.27
PRKCB-209ENST00000498058 ANKRD23Q86SG2 305 aa22.96■■□□□ 1.27
PRKCB-209ENST00000498058 FAM163AQ96GL9 167 aaPredicted RBP22.96■■□□□ 1.27
PRKCB-209ENST00000498058 CPA4Q9UI42 421 aa22.96■■□□□ 1.27
PRKCB-209ENST00000498058 PDHXO00330 501 aa22.95■■□□□ 1.26
PRKCB-209ENST00000498058 ENTPD3O75355 529 aa22.95■■□□□ 1.26
PRKCB-209ENST00000498058 BTDP43251 543 aa22.95■■□□□ 1.26
PRKCB-209ENST00000498058 GPAT2Q6NUI2 795 aa22.95■■□□□ 1.26
PRKCB-209ENST00000498058 DZIP1Q86YF9 867 aaKnown RBP22.95■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms