RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 UBAC1Q9BSL1 405 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 GREM2Q9H772 168 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 USP25Q9UHP3 1055 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CAVIN2O95810 425 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 PLA2G12BQ9BX93 195 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CSADQ9Y600 493 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 IVNS1ABPQ9Y6Y0 642 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CDHR2Q9BYE9 1310 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CCDC196A0A1B0GTZ2 297 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 IFIT3O14879 490 aaKnown RBP9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 PFKFB2O60825 505 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 NAA16Q6N069 864 aaPredicted RBP9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 NUP133Q8WUM0 1156 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 PICK1Q9NRD5 415 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 MED23Q9ULK4 1368 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 PDE8BO95263 885 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 ADORA1P30542 326 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 METAP2P50579 478 aaKnown RBP eCLIP9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 TCP10Q12799 353 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CHST3Q7LGC8 479 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF444Q8N0Y2 327 aaPredicted RBP9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF274Q96GC6 653 aaPredicted RBP9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 CNNM2Q9H8M5 875 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 DACT1Q9NYF0 836 aa9.26□□□□□ -0.93
HLA-DMB-262ENST00000498020 MAST3O60307 1309 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 LRRC37A3O60309 1634 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 JAK2O60674 1132 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 GNAT2P19087 354 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZYXQ15942 572 aaKnown RBP9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 TMEM67Q5HYA8 995 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 WWC2Q6AWC2 1192 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 TTLL11Q8NHH1 800 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 BRMS1Q9HCU9 246 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 SLC12A7Q9Y666 1083 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 GOLGA8AA7E2F4 631 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 CNGA1P29973 690 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 CHRNA5P30532 468 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 CASP7P55210 303 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 SOGA3Q5TF21 947 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 OTUD7BQ6GQQ9 843 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 CKAP2LQ8IYA6 745 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 CYP19A1P11511 503 aaPredicted RBP9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 MFSD6Q6ZSS7 791 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 HOMER1Q86YM7 354 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 KRT23Q9C075 422 aa9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 RRAGDQ9NQL2 400 aaPredicted RBP9.25□□□□□ -0.93
HLA-DMB-262ENST00000498020 GTF2IP78347 998 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 CCDC93Q567U6 631 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FAM173BQ6P4H8 233 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 ADCY5O95622 1261 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 IARSP41252 1262 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 HLFQ16534 295 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FAM200AQ8TCP9 573 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 LEO1Q8WVC0 666 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 PALLDQ8WX93 1383 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 COL5A2P05997 1499 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 MED1Q15648 1581 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZBTB43O43298 467 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 UBE3CQ15386 1083 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 CCDC102BQ68D86 513 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 CEP57L1Q8IYX8 460 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FSIP1Q8NA03 581 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 DBNDD1Q9H9R9 158 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 DTNBO60941 627 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FGAP02671 866 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 TOB2Q14106 344 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 ARHGEF6Q15052 776 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 TMTC2Q8N394 836 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 MAGEB6Q8N7X4 407 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 OSBP2Q969R2 916 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 FHDC1Q9C0D6 1143 aaPredicted RBP9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 ANO10Q9NW15 660 aa9.24□□□□□ -0.93
HLA-DMB-262ENST00000498020 TNIP1Q15025 636 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 TTLL5Q6EMB2 1281 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 MICU3Q86XE3 530 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF592Q92610 1267 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 TMEM87BQ96K49 555 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ELP1O95163 1332 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 RANBP6O60518 1105 aaKnown RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 PPFIA3O75145 1194 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 CSF1RP07333 972 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 CYP7A1P22680 504 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 LRP10Q7Z4F1 713 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 KCNG4Q8TDN1 519 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 NOD1Q9Y239 953 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 SLC4A4Q9Y6R1 1079 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ABCC12Q96J65 1359 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF532Q9HCE3 1301 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF76P36508 570 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 RPS8P62241 208 aaKnown RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 SSRP1Q08945 709 aaKnown RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 TTC6Q86TZ1 520 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 SPATA5Q8NB90 893 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 MTFR1LQ9H019 292 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 NCOA5Q9HCD5 579 aaKnown RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ANGEL1Q9UNK9 670 aaKnown RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZKSCAN5Q9Y2L8 839 aa9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 RPAP1Q9BWH6 1393 aaPredicted RBP9.23□□□□□ -0.93
HLA-DMB-262ENST00000498020 ZNF165P49910 485 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms