RNA–Protein interactions for RNA: ENST00000497832.1

RNF25-206, Transcript of ring finger protein 25, human

TSL 3

Gene RNF25, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF25-206	ENST00000497832	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	MAP3K21	Q5TCX8	1036 aa		13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	PPM1E	Q8WY54	764 aa		13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	CD209	Q9NNX6	404 aa		13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	FRMPD3	Q5JV73	1810 aa		13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	CHD7	Q9P2D1	2997 aa		13.98	□□□□□ -0.17
RNF25-206	ENST00000497832	TRANK1	O15050	2925 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	PDE8A	O60658	829 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	RBM5	P52756	815 aa	Known RBP eCLIP	13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	TRIM32	Q13049	653 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	PDE3A	Q14432	1141 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	CDC5L	Q99459	802 aa	Known RBP	13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	TDRD3	Q9H7E2	651 aa	Known RBP	13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	CXXC1	Q9P0U4	656 aa	Predicted RBP	13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	PRKAG2	Q9UGJ0	569 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	PLXNB2	O15031	1838 aa		13.97	□□□□□ -0.17
RNF25-206	ENST00000497832	KLRK1	P26718	216 aa		13.96	□□□□□ -0.17
RNF25-206	ENST00000497832	NHLH1	Q02575	133 aa		13.96	□□□□□ -0.17
RNF25-206	ENST00000497832	RIC3	Q7Z5B4	369 aa		13.96	□□□□□ -0.17
RNF25-206	ENST00000497832	GAS2L1	Q99501	681 aa	Predicted RBP	13.96	□□□□□ -0.17
RNF25-206	ENST00000497832	MYH3	P11055	1940 aa		13.96	□□□□□ -0.18
RNF25-206	ENST00000497832	TCP10L2	B9ZVM9	353 aa		13.95	□□□□□ -0.18
RNF25-206	ENST00000497832	HOOK2	Q96ED9	719 aa		13.95	□□□□□ -0.18
RNF25-206	ENST00000497832	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.95	□□□□□ -0.18
RNF25-206	ENST00000497832	ZNF576	Q9H609	170 aa		13.95	□□□□□ -0.18
RNF25-206	ENST00000497832	SERPINA10	Q9UK55	444 aa		13.95	□□□□□ -0.18
RNF25-206	ENST00000497832	SMIM22	K7EJ46	135 aa		13.94	□□□□□ -0.18
RNF25-206	ENST00000497832	DNAJB2	P25686	324 aa		13.94	□□□□□ -0.18
RNF25-206	ENST00000497832	SLC45A1	Q9Y2W3	748 aa		13.94	□□□□□ -0.18
RNF25-206	ENST00000497832	C5orf42	Q9H799	3197 aa		13.93	□□□□□ -0.18
RNF25-206	ENST00000497832	LHX8	Q68G74	356 aa		13.93	□□□□□ -0.18
RNF25-206	ENST00000497832	GJD2	Q9UKL4	321 aa		13.93	□□□□□ -0.18
RNF25-206	ENST00000497832	PTPRF	P10586	1907 aa		13.93	□□□□□ -0.18
RNF25-206	ENST00000497832	RLF	Q13129	1914 aa		13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	CXCL11	O14625	94 aa		13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	PCCA	P05165	728 aa	Predicted RBP	13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	IL1R1	P14778	569 aa		13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	DZIP1L	Q8IYY4	767 aa	Known RBP	13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	TRIB2	Q92519	343 aa		13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	NUDC	Q9Y266	331 aa		13.92	□□□□□ -0.18
RNF25-206	ENST00000497832	FAM86C2P	A6NEL3	165 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	PRKAR2A	P13861	404 aa	Known RBP	13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	INPP5B	P32019	993 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	AAK1	Q2M2I8	961 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	DCAF15	Q66K64	600 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	BAD	Q92934	168 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	ZNF341	Q9BYN7	854 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	ANKRD2	Q9GZV1	360 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	KCNH6	Q9H252	994 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	TSPYL4	Q9UJ04	414 aa		13.91	□□□□□ -0.18
RNF25-206	ENST00000497832	ZDBF2	Q9HCK1	2354 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	PRR33	A8MZF0	331 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	FAM110C	Q1W6H9	321 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	CC2D1B	Q5T0F9	858 aa	Known RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	C15orf52	Q6ZUT6	534 aa	Known RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	FASTKD5	Q7L8L6	764 aa	Known RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	RNPC3	Q96LT9	517 aa	Known RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	SENP6	Q9GZR1	1112 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	ZNF112	Q9UJU3	913 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	MYO9B	Q13459	2157 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832	SPTBN4	Q9H254	2564 aa		13.9	□□□□□ -0.18
RNF25-206	ENST00000497832		A0A1B0GUL6	1792 aa		13.89	□□□□□ -0.19
RNF25-206	ENST00000497832		A0A0G2JLL6	359 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	PER1	O15534	1290 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	RTP1	P59025	263 aa		13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	CCDC85B	Q15834	202 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	NOL9	Q5SY16	702 aa	Known RBP	13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	PRRT2	Q7Z6L0	340 aa	Predicted RBP	13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	FAM83A	Q86UY5	434 aa		13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	TIFA	Q96CG3	184 aa		13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	CFAP53	Q96M91	514 aa		13.89	□□□□□ -0.19
RNF25-206	ENST00000497832	LRRC37A2	A6NM11	1700 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	PI4K2B	G5E9Z4	385 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	CTSW	P56202	376 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	ADGRE1	Q14246	886 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	ANKRD13C	Q8N6S4	541 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	TTLL11	Q8NHH1	800 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	SMCR8	Q8TEV9	937 aa	Predicted RBP	13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	KHSRP	Q92945	711 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	PRDM12	Q9H4Q4	367 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	BABAM1	Q9NWV8	329 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	CHPF2	Q9P2E5	772 aa		13.88	□□□□□ -0.19
RNF25-206	ENST00000497832	PLXNA1	Q9UIW2	1896 aa		13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	ST18	O60284	1047 aa		13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	KCNQ1	P51787	676 aa		13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	CCDC191	Q8NCU4	936 aa		13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	GREM2	Q9H772	168 aa		13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	TTF2	Q9UNY4	1162 aa	Known RBP	13.87	□□□□□ -0.19
RNF25-206	ENST00000497832	XRCC5	P13010	732 aa	Known RBP	13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	ATN1	P54259	1190 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	TFF2	Q03403	129 aa		13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	CACNB2	Q08289	660 aa	Predicted RBP	13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	FKBP1C	Q5VVH2	108 aa		13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	ZNF804A	Q7Z570	1209 aa		13.86	□□□□□ -0.19
RNF25-206	ENST00000497832	CRK	P46108	304 aa		13.85	□□□□□ -0.19
RNF25-206	ENST00000497832	KCNJ4	P48050	445 aa		13.85	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms