RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 GADD45BO75293 160 aaPredicted RBP6.06□□□□□ -1.44
PSPC1-205ENST00000497722 AP3B2Q13367 1082 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 CPSF6Q16630 551 aaKnown RBP eCLIP6.06□□□□□ -1.44
PSPC1-205ENST00000497722 CORO1BQ9BR76 489 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 WDR18Q9BV38 432 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 ZFYVE1Q9HBF4 777 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 FAM105AQ9NUU6 356 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 PCDHGC5Q9Y5F6 944 aa6.06□□□□□ -1.44
PSPC1-205ENST00000497722 AOC2O75106 756 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 USP11P51784 963 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 MSMPQ1L6U9 139 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 FBLN7Q53RD9 439 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 HP1BP3Q5SSJ5 553 aaPredicted RBP6.05□□□□□ -1.44
PSPC1-205ENST00000497722 PAOXQ6QHF9 649 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 PDZD3Q86UT5 571 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 HOMEZQ8IX15 550 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 DDX54Q8TDD1 881 aaKnown RBP6.05□□□□□ -1.44
PSPC1-205ENST00000497722 WDR89Q96FK6 387 aaPredicted RBP6.05□□□□□ -1.44
PSPC1-205ENST00000497722 BCO2Q9BYV7 579 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 SEMA6CQ9H3T2 930 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 CCDC86Q9H6F5 360 aaKnown RBP6.05□□□□□ -1.44
PSPC1-205ENST00000497722 PIM2Q9P1W9 311 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 PPP1R9AQ9ULJ8 1098 aa6.05□□□□□ -1.44
PSPC1-205ENST00000497722 ANGEL1Q9UNK9 670 aaKnown RBP6.05□□□□□ -1.44
PSPC1-205ENST00000497722 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.04□□□□□ -1.44
PSPC1-205ENST00000497722 ZNF862O60290 1169 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 RXRBP28702 533 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 FMR1Q06787 632 aaKnown RBP eCLIP6.04□□□□□ -1.44
PSPC1-205ENST00000497722 NFKBIBQ15653 356 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 NFXL1Q6ZNB6 911 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 C3orf58Q8NDZ4 430 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 C1GALT1Q9NS00 363 aa6.04□□□□□ -1.44
PSPC1-205ENST00000497722 BIN2Q9UBW5 565 aaPredicted RBP6.04□□□□□ -1.44
PSPC1-205ENST00000497722 NFICP08651 508 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 XRCC5P13010 732 aaKnown RBP6.03□□□□□ -1.44
PSPC1-205ENST00000497722 FOSL1P15407 271 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 JUNBP17275 347 aaPredicted RBP6.03□□□□□ -1.44
PSPC1-205ENST00000497722 ZNF157P51786 506 aaPredicted RBP6.03□□□□□ -1.44
PSPC1-205ENST00000497722 PLCB3Q01970 1234 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
PSPC1-205ENST00000497722 AKAP4Q5JQC9 854 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 FBXL6Q8N531 539 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 STK35Q8TDR2 534 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 KRTAP17-1Q9BYP8 105 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 KRT82Q9NSB4 513 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 CACNA2D2Q9NY47 1150 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 CRIM1Q9NZV1 1036 aa6.03□□□□□ -1.44
PSPC1-205ENST00000497722 PNMA6FA0A0J9YX94 578 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 TMPRSS2O15393 492 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 DYNC1LI2O43237 492 aaPredicted RBP6.02□□□□□ -1.45
PSPC1-205ENST00000497722 PRNPP04156 253 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 GSTP1P09211 210 aaKnown RBP6.02□□□□□ -1.45
PSPC1-205ENST00000497722 MAPK1P28482 360 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 FCGRTP55899 365 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 KIF4BQ2VIQ3 1234 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 NXPE4Q6UWF7 544 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 DYMQ7RTS9 669 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 YIPF2Q9BWQ6 316 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 ATG3Q9NT62 314 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 NLRP2Q9NX02 1062 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 IVNS1ABPQ9Y6Y0 642 aa6.02□□□□□ -1.45
PSPC1-205ENST00000497722 FAM170BA6NMN3 283 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 LIG1P18858 919 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 ASPAP45381 313 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 KCNA1Q09470 495 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 MAP7Q14244 749 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 DTHD1Q6ZMT9 781 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 SPOCD1Q6ZMY3 1216 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 CBLL1Q75N03 491 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 ANKRD24Q8TF21 1146 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 TBC1D32Q96NH3 1257 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 ASB16Q96NS5 453 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 SETDB2Q96T68 719 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 METTL22Q9BUU2 404 aaPredicted RBP6.01□□□□□ -1.45
PSPC1-205ENST00000497722 OSBPL1AQ9BXW6 950 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 RAD18Q9NS91 495 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 TMEM39AQ9NV64 488 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
PSPC1-205ENST00000497722 PDIA4P13667 645 aaKnown RBP6□□□□□ -1.45
PSPC1-205ENST00000497722 ITGB5P18084 799 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 RAB6AP20340 208 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 ZNF252P-AS1Q0IIN9 211 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 PDE3AQ14432 1141 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 GIMAP7Q8NHV1 300 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 FBF1Q8TES7 1133 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 FANCD2OSQ96PS1 177 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 TRAIPQ9BWF2 469 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 OSBPL7Q9BZF2 842 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 DISC1Q9NRI5 854 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 AP4E1Q9UPM8 1137 aa6□□□□□ -1.45
PSPC1-205ENST00000497722 DBX1A6NMT0 343 aa5.99□□□□□ -1.45
PSPC1-205ENST00000497722 FBXL18Q96ME1 805 aa5.99□□□□□ -1.45
PSPC1-205ENST00000497722 NECAB3Q96P71 396 aaPredicted RBP5.99□□□□□ -1.45
PSPC1-205ENST00000497722 ZC3H12CQ9C0D7 883 aaKnown RBP5.99□□□□□ -1.45
PSPC1-205ENST00000497722 ARNTP27540 789 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 ID3Q02535 119 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 PPP2R3AQ06190 1150 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 OGFOD3Q6PK18 319 aa5.98□□□□□ -1.45
PSPC1-205ENST00000497722 ZNF765Q7L2R6 523 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms