RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 GREM2Q9H772 168 aa23.86■■□□□ 1.41
ACTN4-208ENST00000497637 TAF1P21675 1872 aa23.85■■□□□ 1.41
ACTN4-208ENST00000497637 SCN9AQ15858 1988 aa23.85■■□□□ 1.41
ACTN4-208ENST00000497637 ITGA6P23229 1130 aa23.85■■□□□ 1.41
ACTN4-208ENST00000497637 SNX21Q969T3 373 aa23.85■■□□□ 1.41
ACTN4-208ENST00000497637 DBNDD2Q9BQY9 259 aa23.85■■□□□ 1.41
ACTN4-208ENST00000497637 SLC4A3P48751 1232 aa23.84■■□□□ 1.41
ACTN4-208ENST00000497637 ZNF333Q96JL9 665 aa23.84■■□□□ 1.41
ACTN4-208ENST00000497637 TBC1D2Q9BYX2 928 aa23.84■■□□□ 1.41
ACTN4-208ENST00000497637 AKAP2Q9Y2D5 859 aa23.84■■□□□ 1.41
ACTN4-208ENST00000497637 CD99L2Q8TCZ2 262 aa23.83■■□□□ 1.41
ACTN4-208ENST00000497637 CCDC85AQ96PX6 553 aaPredicted RBP23.83■■□□□ 1.41
ACTN4-208ENST00000497637 BOLA2Q9H3K6 86 aa23.83■■□□□ 1.41
ACTN4-208ENST00000497637 RIPOR2Q9Y4F9 1068 aa23.83■■□□□ 1.41
ACTN4-208ENST00000497637 UNCXA6NJT0 531 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 HIP1O00291 1037 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 WNT10BO00744 389 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 SGSM2O43147 1006 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 SP3Q02447 781 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 APOBEC3FQ8IUX4 373 aaKnown RBP23.82■■□□□ 1.4
ACTN4-208ENST00000497637 RUFY2Q8WXA3 655 aa23.82■■□□□ 1.4
ACTN4-208ENST00000497637 ANGEL1Q9UNK9 670 aaKnown RBP23.82■■□□□ 1.4
ACTN4-208ENST00000497637 RANBP2P49792 3224 aaKnown RBP23.82■■□□□ 1.4
ACTN4-208ENST00000497637 SLC4A8Q2Y0W8 1093 aa23.81■■□□□ 1.4
ACTN4-208ENST00000497637 MYO3BQ8WXR4 1341 aa23.81■■□□□ 1.4
ACTN4-208ENST00000497637 PRKG1Q13976 671 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 RABEP1Q15276 862 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 SLC9C1Q4G0N8 1177 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 CHRDL2Q6WN34 429 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 LDHAL6AQ6ZMR3 332 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 NEUROD6Q96NK8 337 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 HAUS7Q99871 368 aa23.8■■□□□ 1.4
ACTN4-208ENST00000497637 IGF2BP3O00425 579 aaKnown RBP eCLIP23.79■■□□□ 1.42e-6■■■□□ 16
ACTN4-208ENST00000497637 TIMM10P62072 90 aa23.79■■□□□ 1.4
ACTN4-208ENST00000497637 CCDC152Q4G0S7 254 aa23.79■■□□□ 1.4
ACTN4-208ENST00000497637 TICAM2Q86XR7 235 aa23.79■■□□□ 1.4
ACTN4-208ENST00000497637 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.79■■□□□ 1.4
ACTN4-208ENST00000497637 DIAPH3Q9NSV4 1193 aa23.79■■□□□ 1.4
ACTN4-208ENST00000497637 A0A1B0GUL7 405 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 MCCP23508 829 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 CRHR2Q13324 411 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 MAP3K11Q16584 847 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 IL17RAQ96F46 866 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 XDHP47989 1333 aa23.78■■□□□ 1.4
ACTN4-208ENST00000497637 PPP1R12BO60237 982 aaPredicted RBP23.77■■□□□ 1.4
ACTN4-208ENST00000497637 ATP2B4P23634 1241 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 METTL24Q5JXM2 366 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 HSCBQ8IWL3 235 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 WNK4Q96J92 1243 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 ANO2Q9NQ90 1003 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 CNNM1Q9NRU3 951 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 RFX7Q2KHR2 1363 aa23.77■■□□□ 1.4
ACTN4-208ENST00000497637 RBM27Q9P2N5 1060 aaKnown RBP23.76■■□□□ 1.39
ACTN4-208ENST00000497637 ANAPC15P60006 121 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 DACT2Q5SW24 774 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 FSD1Q9BTV5 496 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 IL25Q9H293 177 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 SNRKQ9NRH2 765 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 RAD50Q92878 1312 aa23.75■■□□□ 1.39
ACTN4-208ENST00000497637 MYH3P11055 1940 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 STRIP1Q5VSL9 837 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 CWC27Q6UX04 472 aaKnown RBP23.74■■□□□ 1.39
ACTN4-208ENST00000497637 KIAA1211Q6ZU35 1233 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 VGLL2Q8N8G2 317 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 XAGE2Q96GT9 111 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 LSG1Q9H089 658 aaKnown RBP23.74■■□□□ 1.39
ACTN4-208ENST00000497637 MROH5Q6ZUA9 1318 aa23.74■■□□□ 1.39
ACTN4-208ENST00000497637 COL6A3P12111 3177 aa23.73■■□□□ 1.39
ACTN4-208ENST00000497637 MNX1P50219 401 aaPredicted RBP23.73■■□□□ 1.39
ACTN4-208ENST00000497637 ATP2B3Q16720 1220 aa23.73■■□□□ 1.39
ACTN4-208ENST00000497637 SEC31BQ9NQW1 1179 aa23.73■■□□□ 1.39
ACTN4-208ENST00000497637 COL1A1P02452 1464 aaPredicted RBP23.73■■□□□ 1.39
ACTN4-208ENST00000497637 AK9Q5TCS8 1911 aa23.72■■□□□ 1.39
ACTN4-208ENST00000497637 CCDC158Q5M9N0 1113 aa23.72■■□□□ 1.39
ACTN4-208ENST00000497637 DEFB129Q9H1M3 183 aa23.72■■□□□ 1.39
ACTN4-208ENST00000497637 PPP2R3BQ9Y5P8 575 aa23.72■■□□□ 1.39
ACTN4-208ENST00000497637 PSME4Q14997 1843 aa23.72■■□□□ 1.39
ACTN4-208ENST00000497637 PDE8BO95263 885 aa23.71■■□□□ 1.39
ACTN4-208ENST00000497637 ADORA1P30542 326 aa23.71■■□□□ 1.39
ACTN4-208ENST00000497637 NMIQ13287 307 aaPredicted RBP23.71■■□□□ 1.39
ACTN4-208ENST00000497637 IL27Q8NEV9 243 aa23.71■■□□□ 1.39
ACTN4-208ENST00000497637 DPF3Q92784 378 aa23.71■■□□□ 1.39
ACTN4-208ENST00000497637 TESPA1A2RU30 521 aaPredicted RBP23.7■■□□□ 1.38
ACTN4-208ENST00000497637 IFIT1P09914 478 aaKnown RBP23.7■■□□□ 1.38
ACTN4-208ENST00000497637 HSPA4P34932 840 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 IGHMBP2P38935 993 aaKnown RBP23.7■■□□□ 1.38
ACTN4-208ENST00000497637 SUPT20HL1Q3ZLR7 823 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 GORABQ5T7V8 394 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 ANKRD18AQ8IVF6 992 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 KBTBD3Q8NAB2 608 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 EDC3Q96F86 508 aaKnown RBP23.7■■□□□ 1.38
ACTN4-208ENST00000497637 CLMNQ96JQ2 1002 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 DNAJC2Q99543 621 aaKnown RBP23.7■■□□□ 1.38
ACTN4-208ENST00000497637 PTCH2Q9Y6C5 1203 aa23.7■■□□□ 1.38
ACTN4-208ENST00000497637 MED23Q9ULK4 1368 aa23.69■■□□□ 1.38
ACTN4-208ENST00000497637 TTC39AQ5SRH9 613 aa23.69■■□□□ 1.38
ACTN4-208ENST00000497637 ZNF512BQ96KM6 892 aaPredicted RBP23.69■■□□□ 1.38
ACTN4-208ENST00000497637 CDC5LQ99459 802 aaKnown RBP23.69■■□□□ 1.38
ACTN4-208ENST00000497637 MPHOSPH8Q99549 860 aa23.69■■□□□ 1.38
ACTN4-208ENST00000497637 COA1Q9GZY4 146 aa23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms