RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 CCDC102BQ68D86 513 aa21.28■■□□□ 1
SMC4-226ENST00000497311 OTOP1Q7RTM1 612 aa21.28■■□□□ 1
SMC4-226ENST00000497311 BRI3BPQ8WY22 251 aa21.28■■□□□ 1
SMC4-226ENST00000497311 ADORA1P30542 326 aa21.27■■□□□ 1
SMC4-226ENST00000497311 SP3Q02447 781 aa21.27■■□□□ 1
SMC4-226ENST00000497311 CDC42EP5Q6NZY7 148 aa21.27■■□□□ 1
SMC4-226ENST00000497311 ERO1BQ86YB8 467 aa21.27■■□□□ 1
SMC4-226ENST00000497311 ZGPATQ8N5A5 531 aaKnown RBP21.27■■□□□ 1
SMC4-226ENST00000497311 ZKSCAN4Q969J2 545 aaPredicted RBP21.27■■□□□ 1
SMC4-226ENST00000497311 SNCAIPQ9Y6H5 919 aa21.27■■□□□ 1
SMC4-226ENST00000497311 ZBTB22O15209 634 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 TRIM27P14373 513 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 TIMM10P62072 90 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 MTX1Q13505 466 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 TAF1CQ15572 869 aaPredicted RBP21.26■□□□□ 0.99
SMC4-226ENST00000497311 MIGA2Q7L4E1 593 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 CD99L2Q8TCZ2 262 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 FRAT1Q92837 279 aaPredicted RBP21.26■□□□□ 0.99
SMC4-226ENST00000497311 ZNF341Q9BYN7 854 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 ZFYVE28Q9HCC9 887 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 AKAP2Q9Y2D5 859 aa21.26■□□□□ 0.99
SMC4-226ENST00000497311 BCAR3O75815 825 aa21.25■□□□□ 0.99
SMC4-226ENST00000497311 TCP10Q12799 353 aa21.25■□□□□ 0.99
SMC4-226ENST00000497311 ATF7IPQ6VMQ6 1270 aa21.25■□□□□ 0.99
SMC4-226ENST00000497311 USP40Q9NVE5 1235 aa21.25■□□□□ 0.99
SMC4-226ENST00000497311 AK9Q5TCS8 1911 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 A0A1B0GUL7 405 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 TNRC18O15417 2968 aaPredicted RBP21.24■□□□□ 0.99
SMC4-226ENST00000497311 GNAI2P04899 355 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 CETPP11597 493 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 TFCP2Q12800 502 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 NFIAQ12857 509 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 FAM43AQ8N2R8 423 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 EFCC1Q9HA90 598 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 PDE4DIPQ5VU43 2346 aa21.24■□□□□ 0.99
SMC4-226ENST00000497311 IRF6O14896 467 aa21.23■□□□□ 0.99
SMC4-226ENST00000497311 WDHD1O75717 1129 aaPredicted RBP21.23■□□□□ 0.99
SMC4-226ENST00000497311 PPIL2Q13356 520 aa21.23■□□□□ 0.99
SMC4-226ENST00000497311 SNAPC2Q13487 334 aa21.23■□□□□ 0.99
SMC4-226ENST00000497311 RASGRF1Q13972 1273 aa21.23■□□□□ 0.99
SMC4-226ENST00000497311 XAGE2Q96GT9 111 aa21.23■□□□□ 0.99
SMC4-226ENST00000497311 INPP5BP32019 993 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 PPATQ06203 517 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 MVPQ14764 893 aaKnown RBP21.22■□□□□ 0.99
SMC4-226ENST00000497311 CLUAP1Q96AJ1 413 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 FAM198AQ9UFP1 575 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 ABCF2Q9UG63 623 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 TNNQ9UQP3 1299 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 PTPN22Q9Y2R2 807 aa21.22■□□□□ 0.99
SMC4-226ENST00000497311 PDS5AQ29RF7 1337 aaKnown RBP21.22■□□□□ 0.99
SMC4-226ENST00000497311 ARHGEF6Q15052 776 aa21.21■□□□□ 0.99
SMC4-226ENST00000497311 SPTY2D1Q68D10 685 aaPredicted RBP21.21■□□□□ 0.99
SMC4-226ENST00000497311 DZIP1Q86YF9 867 aaKnown RBP21.21■□□□□ 0.99
SMC4-226ENST00000497311 SLF2Q8IX21 1173 aa21.21■□□□□ 0.99
SMC4-226ENST00000497311 NEUROD6Q96NK8 337 aa21.21■□□□□ 0.99
SMC4-226ENST00000497311 ZCCHC17Q9NP64 241 aaKnown RBP21.21■□□□□ 0.99
SMC4-226ENST00000497311 ZNF112Q9UJU3 913 aa21.21■□□□□ 0.99
SMC4-226ENST00000497311 MYH2Q9UKX2 1941 aa21.21■□□□□ 0.99
SMC4-226ENST00000497311 BTBD19C9JJ37 291 aa21.2■□□□□ 0.98
SMC4-226ENST00000497311 G3BP1Q13283 466 aaKnown RBP eCLIP21.19■□□□□ 0.98
SMC4-226ENST00000497311 ZKSCAN2Q63HK3 967 aa21.19■□□□□ 0.98
SMC4-226ENST00000497311 IDI2Q9BXS1 227 aa21.19■□□□□ 0.98
SMC4-226ENST00000497311 GAKO14976 1311 aa21.19■□□□□ 0.98
SMC4-226ENST00000497311 PNMA6EA0A0J9YXQ4 647 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 TLR2O60603 784 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 ENTPD3O75355 529 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 RGS3P49796 1198 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 GORABQ5T7V8 394 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 ERICH6Q7L0X2 663 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 ZFPM1Q8IX07 1006 aa21.18■□□□□ 0.98
SMC4-226ENST00000497311 FAM163AQ96GL9 167 aaPredicted RBP21.18■□□□□ 0.98
SMC4-226ENST00000497311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.18■□□□□ 0.98
SMC4-226ENST00000497311 HNRNPUQ00839 825 aaKnown RBP eCLIP21.17■□□□□ 0.98
SMC4-226ENST00000497311 CAP1Q01518 475 aa21.17■□□□□ 0.98
SMC4-226ENST00000497311 NOL9Q5SY16 702 aaKnown RBP21.17■□□□□ 0.98
SMC4-226ENST00000497311 TMEM57Q8N5G2 664 aa21.17■□□□□ 0.98
SMC4-226ENST00000497311 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.17■□□□□ 0.98
SMC4-226ENST00000497311 HTTP42858 3142 aa21.16■□□□□ 0.98
SMC4-226ENST00000497311 BTDP43251 543 aa21.16■□□□□ 0.98
SMC4-226ENST00000497311 ZSCAN29Q8IWY8 852 aaPredicted RBP21.16■□□□□ 0.98
SMC4-226ENST00000497311 KCNH4Q9UQ05 1017 aa21.16■□□□□ 0.98
SMC4-226ENST00000497311 MROH7-TTC4A0A0A0MT08 1334 aa21.15■□□□□ 0.98
SMC4-226ENST00000497311 MECOMQ03112 1051 aa21.15■□□□□ 0.98
SMC4-226ENST00000497311 HMG20BQ9P0W2 317 aa21.15■□□□□ 0.98
SMC4-226ENST00000497311 KIF22Q14807 665 aa21.14■□□□□ 0.97
SMC4-226ENST00000497311 DIEXFQ68CQ4 756 aaKnown RBP21.14■□□□□ 0.97
SMC4-226ENST00000497311 ANKRD23Q86SG2 305 aa21.14■□□□□ 0.97
SMC4-226ENST00000497311 MIER1Q8N108 512 aa21.14■□□□□ 0.97
SMC4-226ENST00000497311 SPATA5Q8NB90 893 aa21.14■□□□□ 0.97
SMC4-226ENST00000497311 ARMC5Q96C12 935 aa21.14■□□□□ 0.97
SMC4-226ENST00000497311 RFX7Q2KHR2 1363 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 ATRNL1Q5VV63 1379 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 GPR75-ASB3A0A0A6YYF3 556 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 ARID4AP29374 1257 aaPredicted RBP21.13■□□□□ 0.97
SMC4-226ENST00000497311 GSTO1P78417 241 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 PICALMQ13492 652 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 SH3BP5LQ7L8J4 393 aa21.13■□□□□ 0.97
SMC4-226ENST00000497311 POTEFA5A3E0 1075 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 PHF20L1A8MW92 1017 aa21.12■□□□□ 0.97
SMC4-226ENST00000497311 PDHXO00330 501 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms