RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 WDR89Q96FK6 387 aaPredicted RBP3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 TCF12Q99081 682 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 USP26Q9BXU7 913 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 LGR6Q9HBX8 967 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 ABCB6Q9NP58 842 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 EGFL7Q9UHF1 273 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 DCTN4Q9UJW0 460 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 ANKRD33BA6NCL7 494 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 SMNDC1O75940 238 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 ELNP15502 786 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 SATB1Q01826 763 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 RGL3Q3MIN7 710 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 DDX46Q7L014 1031 aaKnown RBP3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 UBXN4Q92575 508 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 RBM28Q9NW13 759 aaKnown RBP3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 KLHL42Q9P2K6 505 aa3.87□□□□□ -1.79
SNRNP48-202ENST00000496946 TREHO43280 583 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 PPFIA4O75335 1185 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 LIG1P18858 919 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 NOS3P29474 1203 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 ADGRE1Q14246 886 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 ALKBH2Q6NS38 261 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 ACAD11Q709F0 780 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 SHISA5Q8N114 240 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 UBL7Q96S82 380 aaPredicted RBP3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 MAP7D2Q96T17 732 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 RBSNQ9H1K0 784 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 FRMD4BQ9Y2L6 1034 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 MRVI1Q9Y6F6 885 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 GADD45BO75293 160 aaPredicted RBP3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 PAGE1O75459 146 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 KIF20AO95235 890 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 USP5P45974 858 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 FCGRTP55899 365 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 ZFYVE27Q5T4F4 411 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 RASIP1Q5U651 963 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 B4GALNT3Q6L9W6 998 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 ILDR2Q71H61 639 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 GET4Q7L5D6 327 aaPredicted RBP3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 GLIS3Q8NEA6 775 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 STK35Q8TDR2 534 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 FAM13BQ9NYF5 915 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 MAGEC2Q9UBF1 373 aaPredicted RBP3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 PNMA2Q9UL42 364 aa3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.86□□□□□ -1.79
SNRNP48-202ENST00000496946 MSTNO14793 375 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 EPB41L2O43491 1005 aaKnown RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 SH3BP5O60239 455 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 CPNE3O75131 537 aaKnown RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 MEI1Q5TIA1 1274 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 XKR5Q6UX68 686 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 DNAJC14Q6Y2X3 702 aaPredicted RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 KRTAP1-3Q8IUG1 177 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 CREBRFQ8IUR6 639 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 TRIM56Q9BRZ2 755 aaKnown RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 EHD4Q9H223 541 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 LIN7BQ9HAP6 207 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 NOP53Q9NZM5 478 aaKnown RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 EXOC5O00471 708 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 EDN3P14138 238 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 CD68P34810 354 aaPredicted RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 RHBDL3P58872 404 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 GSTM4Q03013 218 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 IKBKEQ14164 716 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 DSC3Q14574 896 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 ZRSR2Q15696 482 aaKnown RBP3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 PRRT3Q5FWE3 981 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 ZKSCAN2Q63HK3 967 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 TPTE2Q6XPS3 522 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 CCNJLQ8IV13 435 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 CACTIN-AS1Q8N1I8 211 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 PRDM6Q9NQX0 595 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 FRRS1LQ9P0K9 344 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 SOX13Q9UN79 622 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 AKAP2Q9Y2D5 859 aa3.85□□□□□ -1.79
SNRNP48-202ENST00000496946 A0A096LPE4 126 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 A0A1W2PPZ6 126 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 TPM2P07951 284 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 PAX3P23760 479 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 CDC27P30260 824 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 LMOD3Q0VAK6 560 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 SUZ12Q15022 739 aaKnown RBP3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 ATL2Q8NHH9 583 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 BSNDQ8WZ55 320 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 TP53INP1Q96A56 240 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 RBCK1Q9BYM8 510 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 BCO2Q9BYV7 579 aa3.84□□□□□ -1.79
SNRNP48-202ENST00000496946 GOLGA6L3A6NEY3 463 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 CREB3O43889 395 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 ESRRAP11474 423 aaPredicted RBP3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 PREPP48147 710 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 DMTNQ08495 405 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 KIAA1211Q6ZU35 1233 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 ZCRB1Q8TBF4 217 aaKnown RBP3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 WFDC12Q8WWY7 111 aa3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 ZHX1Q9UKY1 873 aaPredicted RBP3.84□□□□□ -1.8
SNRNP48-202ENST00000496946 LOC100289279A0A1B0GTE1 492 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 PTPRAP18433 802 aa3.83□□□□□ -1.8
SNRNP48-202ENST00000496946 GATA4P43694 442 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms