RNA–Protein interactions for RNA: ENST00000496144.5

VPS13B-206, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 5,625 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-206ENST00000496144 IVNS1ABPQ9Y6Y0 642 aa10.18□□□□□ -0.78
VPS13B-206ENST00000496144 AOC2O75106 756 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 MAP4K4O95819 1239 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-206ENST00000496144 MTX1Q13505 466 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 PPP4R3BQ5MIZ7 849 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 SAMD1Q6SPF0 538 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-206ENST00000496144 ELP3Q9H9T3 547 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.17□□□□□ -0.782e-8■■■■■ 42.5
VPS13B-206ENST00000496144 CIZ1Q9ULV3 898 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-206ENST00000496144 TRIM17Q9Y577 477 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 SCN7AQ01118 1682 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 CCL15-CCL14A0A0B4J2E2 113 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 REC8O95072 547 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 CCL15Q16663 113 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 NAA16Q6N069 864 aaPredicted RBP10.17□□□□□ -0.78
VPS13B-206ENST00000496144 JMYQ8N9B5 988 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 C7orf43Q8WVR3 580 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 SERPINA10Q9UK55 444 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 FCGRTP55899 365 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 CCNA1P78396 465 aa10.17□□□□□ -0.78
VPS13B-206ENST00000496144 COL5A3P25940 1745 aaPredicted RBP10.16□□□□□ -0.78
VPS13B-206ENST00000496144 FOXN1O15353 648 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 DEFB129Q9H1M3 183 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 TSKSQ9UJT2 592 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 TSHZ3Q63HK5 1081 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 IL17RAQ96F46 866 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 ESYT1Q9BSJ8 1104 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 CRNKL1Q9BZJ0 848 aaKnown RBP10.16□□□□□ -0.78
VPS13B-206ENST00000496144 HDLBPQ00341 1268 aaKnown RBP10.16□□□□□ -0.78
VPS13B-206ENST00000496144 NKX2-3Q8TAU0 364 aa10.16□□□□□ -0.78
VPS13B-206ENST00000496144 MPHOSPH6Q99547 160 aaKnown RBP10.16□□□□□ -0.78
VPS13B-206ENST00000496144 GYG1P46976 350 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 PI4K2BQ8TCG2 481 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 RHPN1Q8TCX5 695 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 ABHD8Q96I13 439 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 ZNF594Q96JF6 807 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 TRIM47Q96LD4 638 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 HTATIP2Q9BUP3 242 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 NR2E3Q9Y5X4 410 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 RTL9Q8NET4 1388 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 PRMT2P55345 433 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 RAB3GAP1Q15042 981 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 WRNIP1Q96S55 665 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 ZNF70Q9UC06 446 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 IKQ13123 557 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 TTC6Q86TZ1 520 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 TEX11Q8IYF3 940 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 GTF3C2Q8WUA4 911 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 KIF1BPQ96EK5 621 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 OTUD5Q96G74 571 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 KCNH4Q9UQ05 1017 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 IDH1O75874 414 aaKnown RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 ZBTB48P10074 688 aaPredicted RBP10.15□□□□□ -0.78
VPS13B-206ENST00000496144 SLC9C1Q4G0N8 1177 aa10.15□□□□□ -0.78
VPS13B-206ENST00000496144 HSPA8P11142 646 aaKnown RBP10.15□□□□□ -0.79
VPS13B-206ENST00000496144 CHMLP26374 656 aa10.15□□□□□ -0.79
VPS13B-206ENST00000496144 NACAP1Q9BZK3 213 aa10.15□□□□□ -0.79
VPS13B-206ENST00000496144 APPP05067 770 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 LRP10Q7Z4F1 713 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 SUCLG2Q96I99 432 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 CIAO1O76071 339 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 ATP2B2Q01814 1243 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 RASA3Q14644 834 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 MCM4P33991 863 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 TCP10Q12799 353 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 C3orf67Q6ZVT6 689 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 SAPCD2Q86UD0 394 aa10.14□□□□□ -0.79
VPS13B-206ENST00000496144 ZNF280AP59817 542 aaPredicted RBP10.14□□□□□ -0.79
VPS13B-206ENST00000496144 EPB41L2O43491 1005 aaKnown RBP10.13□□□□□ -0.79
VPS13B-206ENST00000496144 POTEIP0CG38 1075 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 POTEJP0CG39 1038 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 COL1A1P02452 1464 aaPredicted RBP10.13□□□□□ -0.79
VPS13B-206ENST00000496144 TTC41PQ6P2S7 1318 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 DDX11L8A8MPP1 907 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 PDE8BO95263 885 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 GNRH1P01148 92 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 DNAJC2Q99543 621 aaKnown RBP10.13□□□□□ -0.79
VPS13B-206ENST00000496144 WBP1LQ9NX94 342 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 RNF186Q9NXI6 227 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 BCAMP50895 628 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 SP3Q02447 781 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 SLC10A3P09131 477 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 USP14P54578 494 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 ERO1BQ86YB8 467 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 IL1RAPL2Q9NP60 686 aa10.13□□□□□ -0.79
VPS13B-206ENST00000496144 TDRD3Q9H7E2 651 aaKnown RBP10.12□□□□□ -0.79
VPS13B-206ENST00000496144 TRIM6-TRIM34B2RNG4 842 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 ECM2O94769 699 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-206ENST00000496144 TNPO1Q92973 898 aaKnown RBP10.12□□□□□ -0.79
VPS13B-206ENST00000496144 RILPL2Q969X0 211 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 MCOLN1Q9GZU1 580 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 DPF3Q92784 378 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 WNK4Q96J92 1243 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 CSRNP1Q96S65 589 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 MYCNP04198 464 aaPredicted RBP10.12□□□□□ -0.79
VPS13B-206ENST00000496144 CAPN2P17655 700 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 AACSQ86V21 672 aa10.12□□□□□ -0.79
VPS13B-206ENST00000496144 PASKQ96RG2 1323 aa10.11□□□□□ -0.79
VPS13B-206ENST00000496144 ST18O60284 1047 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms