RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, human

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CALD1-223	ENST00000496024	IGHD	P01880	384 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	LDHC	P07864	332 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	TNNI2	P48788	182 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	GSTO1	P78417	241 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	TCP10	Q12799	353 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	TNFAIP1	Q13829	316 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	B4GALNT3	Q6L9W6	998 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	SAPCD2	Q86UD0	394 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	CDAN1	Q8IWY9	1227 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	KLRG1	Q96E93	195 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	EDC3	Q96F86	508 aa	Known RBP	11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	TMEM39B	Q9GZU3	492 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	TLL2	Q9Y6L7	1015 aa		11.97	□□□□□ -0.49
CALD1-223	ENST00000496024	CNTNAP1	P78357	1384 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	GAK	O14976	1311 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	UBE2Q2L	H0YL09	131 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	ATP5J	P18859	108 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	VEGFB	P49765	207 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	NFIA	Q12857	509 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	CYP4F22	Q6NT55	531 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	PIAS4	Q8N2W9	510 aa	Predicted RBP	11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	OTUD7A	Q8TE49	926 aa	Predicted RBP	11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	GCC1	Q96CN9	775 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	GPATCH3	Q96I76	525 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	NOL10	Q9BSC4	688 aa	Known RBP	11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	PPP2R3B	Q9Y5P8	575 aa		11.96	□□□□□ -0.49
CALD1-223	ENST00000496024	RASSF10	A6NK89	507 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	CYP7A1	P22680	504 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	MAP3K12	Q12852	859 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	PICALM	Q13492	652 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	SUPT20HL1	Q3ZLR7	823 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	MAGEB6	Q8N7X4	407 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	FAM163A	Q96GL9	167 aa	Predicted RBP	11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	ECHDC1	Q9NTX5	307 aa		11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	ANGEL1	Q9UNK9	670 aa	Known RBP	11.95	□□□□□ -0.5
CALD1-223	ENST00000496024	GPR75-ASB3	A0A0A6YYF3	556 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	MAP4K4	O95819	1239 aa	Predicted RBP	11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	RGS3	P49796	1198 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	ZNF157	P51786	506 aa	Predicted RBP	11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	TTF1	Q15361	905 aa	Predicted RBP	11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	ARMC9	Q7Z3E5	817 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	ADGRA1	Q86SQ6	560 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	ZFPM1	Q8IX07	1006 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	MIGA1	Q8NAN2	632 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	CAPNS2	Q96L46	248 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	HAUS7	Q99871	368 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	LNPK	Q9C0E8	428 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	PAG1	Q9NWQ8	432 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	FAM198A	Q9UFP1	575 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	MAST2	Q6P0Q8	1798 aa		11.94	□□□□□ -0.5
CALD1-223	ENST00000496024	SSC5D	A1L4H1	1573 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	WDR33	Q9C0J8	1336 aa	Known RBP	11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	PAPPA2	Q9BXP8	1791 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	ECE1	P42892	770 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	DYNLL1	P63167	89 aa	Known RBP	11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	FKBP1B	P68106	108 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	SLC9C2	Q5TAH2	1124 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	FKBP1C	Q5VVH2	108 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	RGMB	Q6NW40	437 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	FAM83A	Q86UY5	434 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	TEX11	Q8IYF3	940 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	FAM151A	Q8WW52	585 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	TEPSIN	Q96N21	525 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	DOCK2	Q92608	1830 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	PCNT	O95613	3336 aa		11.93	□□□□□ -0.5
CALD1-223	ENST00000496024	PPP1R12B	O60237	982 aa	Predicted RBP	11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	AOC2	O75106	756 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	WDHD1	O75717	1129 aa	Predicted RBP	11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	BAG3	O95817	575 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	PDE6A	P16499	860 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	MX1	P20591	662 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	RHBDL3	P58872	404 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	SLFNL1	Q499Z3	407 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	SMC5	Q8IY18	1101 aa		11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	DDX4	Q9NQI0	724 aa	Known RBP	11.92	□□□□□ -0.5
CALD1-223	ENST00000496024	USP2	O75604	605 aa	Predicted RBP	11.91	□□□□□ -0.5
CALD1-223	ENST00000496024	MKRN3	Q13064	507 aa	Known RBP	11.91	□□□□□ -0.5
CALD1-223	ENST00000496024	MIGA2	Q7L4E1	593 aa		11.91	□□□□□ -0.5
CALD1-223	ENST00000496024	IDI2	Q9BXS1	227 aa		11.91	□□□□□ -0.5
CALD1-223	ENST00000496024	TTC41P	Q6P2S7	1318 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	ZNF532	Q9HCE3	1301 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	MYH7	P12883	1935 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	ERC2	O15083	957 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	ENTPD3	O75355	529 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	CHGB	P05060	677 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	CENPB	P07199	599 aa	Predicted RBP	11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	PLCG2	P16885	1265 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	IREB2	P48200	963 aa	Known RBP	11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	PPP4C	P60510	307 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	CHD1L	Q86WJ1	897 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	MAPKAPK5	Q8IW41	473 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	PI4K2B	Q8TCG2	481 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	TGFBRAP1	Q8WUH2	860 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	HHIPL1	Q96JK4	782 aa		11.9	□□□□□ -0.5
CALD1-223	ENST00000496024	CLMN	Q96JQ2	1002 aa		11.9	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms