RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 HAND2P61296 217 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 TRDNQ13061 729 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 STRIP1Q5VSL9 837 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 FAM163AQ96GL9 167 aaPredicted RBP28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 SPON1Q9HCB6 807 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 ATP8A2Q9NTI2 1148 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 LIMCH1Q9UPQ0 1083 aa28.93■■■□□ 2.22
PPP1R3F-205ENST00000495799 PRKAB2O43741 272 aa28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 CPA1P15085 419 aa28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 PLCG2P16885 1265 aa28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 STOX1Q6ZVD7 989 aa28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 DHX32Q7L7V1 743 aaKnown RBP28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 TMX3Q96JJ7 454 aa28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 ZSCAN31Q96LW9 406 aaPredicted RBP28.92■■■□□ 2.22
PPP1R3F-205ENST00000495799 TIAM2Q8IVF5 1701 aa28.91■■■□□ 2.22
PPP1R3F-205ENST00000495799 GRIK5Q16478 980 aa28.91■■■□□ 2.22
PPP1R3F-205ENST00000495799 RALYLQ86SE5 291 aaKnown RBP28.91■■■□□ 2.22
PPP1R3F-205ENST00000495799 NCOA7Q8NI08 942 aa28.91■■■□□ 2.22
PPP1R3F-205ENST00000495799 USP17L3A6NCW0 530 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 USP17L4A6NCW7 530 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 DIXDC1Q155Q3 683 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 USP17L1Q7RTZ2 530 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 SPRYD3Q8NCJ5 442 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 SDR42E1Q8WUS8 393 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 SLKQ9H2G2 1235 aaPredicted RBP28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 GAKO14976 1311 aa28.89■■■□□ 2.22
PPP1R3F-205ENST00000495799 SH2B1Q9NRF2 756 aaPredicted RBP28.89■■■□□ 2.21
PPP1R3F-205ENST00000495799 GPR75-ASB3A0A0A6YYF3 556 aa28.88■■■□□ 2.21
PPP1R3F-205ENST00000495799 NOL8Q76FK4 1167 aaKnown RBP28.88■■■□□ 2.21
PPP1R3F-205ENST00000495799 RNF41Q9H4P4 317 aaPredicted RBP28.88■■■□□ 2.21
PPP1R3F-205ENST00000495799 CNNM2Q9H8M5 875 aa28.88■■■□□ 2.21
PPP1R3F-205ENST00000495799 WDR19Q8NEZ3 1342 aa28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 FGD1P98174 961 aa28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 CUL4AQ13619 759 aa28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 LARGE2Q8N3Y3 721 aa28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 TTF2Q9UNY4 1162 aaKnown RBP28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 PSME4Q14997 1843 aa28.87■■■□□ 2.21
PPP1R3F-205ENST00000495799 BTDP43251 543 aa28.86■■■□□ 2.21
PPP1R3F-205ENST00000495799 INTS4Q96HW7 963 aaKnown RBP28.86■■■□□ 2.21
PPP1R3F-205ENST00000495799 CWC22Q9HCG8 908 aaKnown RBP28.86■■■□□ 2.21
PPP1R3F-205ENST00000495799 ANAPC4Q9UJX5 808 aa28.86■■■□□ 2.21
PPP1R3F-205ENST00000495799 MCM5P33992 734 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 USP5P45974 858 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 FER1L6Q2WGJ9 1857 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 DACT2Q5SW24 774 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 CERS5Q8N5B7 392 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 ARPP21Q9UBL0 812 aaPredicted RBP28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 LAMB1P07942 1786 aa28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 ZNF646O15015 1829 aaPredicted RBP28.85■■■□□ 2.21
PPP1R3F-205ENST00000495799 PCP11498 1178 aaKnown RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 EXOSC10Q01780 885 aaKnown RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 PPARAQ07869 468 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 AKNAD1Q5T1N1 836 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 TBC1D10CQ8IV04 446 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 AMOTL1Q8IY63 956 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 STAG1Q8WVM7 1258 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 KRT23Q9C075 422 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 TAOK3Q9H2K8 898 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 DCP1AQ9NPI6 582 aaPredicted RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 CIZ1Q9ULV3 898 aaPredicted RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 HHIPL2Q6UWX4 724 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 MFSD6Q6ZSS7 791 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 Q6ZUG5 572 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 MB21D2Q8IYB1 491 aaPredicted RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 MRIQ9BWK5 157 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 NBPF3Q9H094 633 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 ZNF277Q9NRM2 450 aaPredicted RBP28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 CHMP5Q9NZZ3 219 aa28.84■■■□□ 2.21
PPP1R3F-205ENST00000495799 MYO3BQ8WXR4 1341 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 SCN9AQ15858 1988 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 SLC3A2P08195 630 aaKnown RBP28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 IARSP41252 1262 aaKnown RBP28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 HDLBPQ00341 1268 aaKnown RBP28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 NIM1KQ8IY84 436 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 FBXL16Q8N461 479 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 SH3RF3Q8TEJ3 882 aaPredicted RBP28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 TEKT1Q969V4 418 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 BCS1LQ9Y276 419 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 ARFGEF1Q9Y6D6 1849 aa28.83■■■□□ 2.21
PPP1R3F-205ENST00000495799 NAV1Q8NEY1 1877 aa28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 MINDY4BA8MYZ0 360 aa28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 TOB2Q14106 344 aaPredicted RBP28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 SBK1Q52WX2 424 aa28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 DAGLAQ9Y4D2 1042 aa28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 BAZ2AQ9UIF9 1905 aaKnown RBP28.82■■■□□ 2.2
PPP1R3F-205ENST00000495799 F8W031 263 aaPredicted RBP28.81■■■□□ 2.2
PPP1R3F-205ENST00000495799 TCEANC2Q96MN5 208 aa28.81■■■□□ 2.2
PPP1R3F-205ENST00000495799 CTDSPL2Q05D32 466 aa28.8■■■□□ 2.2
PPP1R3F-205ENST00000495799 CTR9Q6PD62 1173 aa28.8■■■□□ 2.2
PPP1R3F-205ENST00000495799 TEX11Q8IYF3 940 aa28.8■■■□□ 2.2
PPP1R3F-205ENST00000495799 AGXT2Q9BYV1 514 aa28.8■■■□□ 2.2
PPP1R3F-205ENST00000495799 FOXD4L1Q9NU39 408 aa28.8■■■□□ 2.2
PPP1R3F-205ENST00000495799 PRC1O43663 620 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 KCNQ5Q9NR82 932 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 LTBP3Q9NS15 1303 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 NT5C2P49902 561 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 MXD3Q9BW11 206 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 ZNRF3Q9ULT6 936 aa28.79■■■□□ 2.2
PPP1R3F-205ENST00000495799 CDK5RAP2Q96SN8 1893 aa28.78■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms