RNA–Protein interactions for RNA: ENST00000495784.1

CLCNKA-207, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 727 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-207ENST00000495784 ADORA1P30542 326 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 CCDC102BQ68D86 513 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 CDC42EP5Q6NZY7 148 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 OTOP1Q7RTM1 612 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 FAM151AQ8WW52 585 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 SNCAIPQ9Y6H5 919 aa22.85■■□□□ 1.25
CLCNKA-207ENST00000495784 TCP10Q12799 353 aa22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 ERO1BQ86YB8 467 aa22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 ZGPATQ8N5A5 531 aaKnown RBP22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 FRAT1Q92837 279 aaPredicted RBP22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 ZKSCAN4Q969J2 545 aaPredicted RBP22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 ZNF341Q9BYN7 854 aa22.84■■□□□ 1.25
CLCNKA-207ENST00000495784 TRIM27P14373 513 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 SP3Q02447 781 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 TAF1CQ15572 869 aaPredicted RBP22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 MIGA2Q7L4E1 593 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 CD99L2Q8TCZ2 262 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 ZFYVE28Q9HCC9 887 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 USP40Q9NVE5 1235 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 AKAP2Q9Y2D5 859 aa22.83■■□□□ 1.25
CLCNKA-207ENST00000495784 WDHD1O75717 1129 aaPredicted RBP22.82■■□□□ 1.24
CLCNKA-207ENST00000495784 TIMM10P62072 90 aa22.82■■□□□ 1.24
CLCNKA-207ENST00000495784 MTX1Q13505 466 aa22.82■■□□□ 1.24
CLCNKA-207ENST00000495784 ATF7IPQ6VMQ6 1270 aa22.82■■□□□ 1.24
CLCNKA-207ENST00000495784 BCAR3O75815 825 aa22.81■■□□□ 1.24
CLCNKA-207ENST00000495784 CETPP11597 493 aa22.81■■□□□ 1.24
CLCNKA-207ENST00000495784 TFCP2Q12800 502 aa22.81■■□□□ 1.24
CLCNKA-207ENST00000495784 NFIAQ12857 509 aa22.81■■□□□ 1.24
CLCNKA-207ENST00000495784 EFCC1Q9HA90 598 aa22.81■■□□□ 1.24
CLCNKA-207ENST00000495784 A0A1B0GUL7 405 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 IRF6O14896 467 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 ZBTB22O15209 634 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 GNAI2P04899 355 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 PPIL2Q13356 520 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 SNAPC2Q13487 334 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 RASGRF1Q13972 1273 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 MVPQ14764 893 aaKnown RBP22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 DZIP1Q86YF9 867 aaKnown RBP22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 FAM43AQ8N2R8 423 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 CLUAP1Q96AJ1 413 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 XAGE2Q96GT9 111 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 ABCF2Q9UG63 623 aa22.8■■□□□ 1.24
CLCNKA-207ENST00000495784 FAM198AQ9UFP1 575 aa22.79■■□□□ 1.24
CLCNKA-207ENST00000495784 TNNQ9UQP3 1299 aa22.79■■□□□ 1.24
CLCNKA-207ENST00000495784 PTPN22Q9Y2R2 807 aa22.79■■□□□ 1.24
CLCNKA-207ENST00000495784 INPP5BP32019 993 aa22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 ARHGEF6Q15052 776 aa22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 SPTY2D1Q68D10 685 aaPredicted RBP22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 SLF2Q8IX21 1173 aa22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 NEUROD6Q96NK8 337 aa22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 PDS5AQ29RF7 1337 aaKnown RBP22.78■■□□□ 1.24
CLCNKA-207ENST00000495784 PPATQ06203 517 aa22.77■■□□□ 1.24
CLCNKA-207ENST00000495784 ZCCHC17Q9NP64 241 aaKnown RBP22.77■■□□□ 1.24
CLCNKA-207ENST00000495784 BTBD19C9JJ37 291 aa22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 GORABQ5T7V8 394 aa22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 ZKSCAN2Q63HK3 967 aa22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 ZNF112Q9UJU3 913 aa22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 GAKO14976 1311 aa22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 TNRC18O15417 2968 aaPredicted RBP22.76■■□□□ 1.23
CLCNKA-207ENST00000495784 RGS3P49796 1198 aa22.75■■□□□ 1.23
CLCNKA-207ENST00000495784 G3BP1Q13283 466 aaKnown RBP eCLIP22.75■■□□□ 1.23
CLCNKA-207ENST00000495784 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.75■■□□□ 1.23
CLCNKA-207ENST00000495784 PDE4DIPQ5VU43 2346 aa22.75■■□□□ 1.23
CLCNKA-207ENST00000495784 ENTPD3O75355 529 aa22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 HNRNPUQ00839 825 aaKnown RBP eCLIP22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 ERICH6Q7L0X2 663 aa22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 ZSCAN29Q8IWY8 852 aaPredicted RBP22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 ZFPM1Q8IX07 1006 aa22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 IDI2Q9BXS1 227 aa22.74■■□□□ 1.23
CLCNKA-207ENST00000495784 AK9Q5TCS8 1911 aa22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 PNMA6EA0A0J9YXQ4 647 aa22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 TLR2O60603 784 aa22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 CAP1Q01518 475 aa22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 NOL9Q5SY16 702 aaKnown RBP22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 TMEM57Q8N5G2 664 aa22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 FAM163AQ96GL9 167 aaPredicted RBP22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.73■■□□□ 1.23
CLCNKA-207ENST00000495784 BTDP43251 543 aa22.72■■□□□ 1.23
CLCNKA-207ENST00000495784 KIF22Q14807 665 aa22.72■■□□□ 1.23
CLCNKA-207ENST00000495784 MROH7-TTC4A0A0A0MT08 1334 aa22.72■■□□□ 1.23
CLCNKA-207ENST00000495784 MYH2Q9UKX2 1941 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 MECOMQ03112 1051 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 SPATA5Q8NB90 893 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 ARMC5Q96C12 935 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 HMG20BQ9P0W2 317 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 KCNH4Q9UQ05 1017 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 HTTP42858 3142 aa22.71■■□□□ 1.23
CLCNKA-207ENST00000495784 PICALMQ13492 652 aa22.7■■□□□ 1.22
CLCNKA-207ENST00000495784 ANKRD23Q86SG2 305 aa22.7■■□□□ 1.22
CLCNKA-207ENST00000495784 MIER1Q8N108 512 aa22.7■■□□□ 1.22
CLCNKA-207ENST00000495784 PICK1Q9NRD5 415 aa22.7■■□□□ 1.22
CLCNKA-207ENST00000495784 RFX7Q2KHR2 1363 aa22.7■■□□□ 1.22
CLCNKA-207ENST00000495784 ATRNL1Q5VV63 1379 aa22.69■■□□□ 1.22
CLCNKA-207ENST00000495784 PDHXO00330 501 aa22.69■■□□□ 1.22
CLCNKA-207ENST00000495784 GSTO1P78417 241 aa22.69■■□□□ 1.22
CLCNKA-207ENST00000495784 PI16Q6UXB8 463 aa22.69■■□□□ 1.22
CLCNKA-207ENST00000495784 FTSJ3Q8IY81 847 aaKnown RBP22.69■■□□□ 1.22
CLCNKA-207ENST00000495784 GPR75-ASB3A0A0A6YYF3 556 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 POTEFA5A3E0 1075 aa22.68■■□□□ 1.22
CLCNKA-207ENST00000495784 LDHCP07864 332 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms