RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 PTPN12Q05209 780 aaKnown RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 KRT32Q14532 448 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 ANKRD1Q15327 319 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC57Q2TAC2 916 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 TNNI3KQ59H18 835 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 NBPF10Q6P3W6 841 aaKnown RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 NBPF15Q8N660 670 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 SMARCC1Q92922 1105 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 ZSCAN31Q96LW9 406 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 KCTD15Q96SI1 283 aaPredicted RBP10.32□□□□□ -0.76
EPHA4-213ENST00000495693 FSD1Q9BTV5 496 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 ISCA1Q9BUE6 129 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 FPGT-TNNI3KV9GXZ4 949 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 MAP3K15Q6ZN16 1313 aa10.32□□□□□ -0.76
EPHA4-213ENST00000495693 NRAPQ86VF7 1730 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 TIMP2P16035 220 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 IL6STP40189 918 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 RFX5P48382 616 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 CUL4AQ13619 759 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 DDB1Q16531 1140 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 TSHZ3Q63HK5 1081 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 ZBTB38Q8NAP3 1195 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 PIGBQ92521 554 aa10.31□□□□□ -0.76
EPHA4-213ENST00000495693 EAF2Q96CJ1 260 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 PA2G4Q9UQ80 394 aaKnown RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 ZNF330Q9Y3S2 320 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.31□□□□□ -0.76
EPHA4-213ENST00000495693 CAPN5O15484 640 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 HMGB2P26583 209 aaKnown RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 KCNJ4P48050 445 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 TAF7LQ5H9L4 462 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 LMBR1LQ6UX01 489 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 CWC27Q6UX04 472 aaKnown RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 DZIP3Q86Y13 1208 aaKnown RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC116Q8IYX3 515 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 KCNB2Q92953 911 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 TNPO1Q92973 898 aaKnown RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 LSG1Q9H089 658 aaKnown RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 SH2B1Q9NRF2 756 aaPredicted RBP10.3□□□□□ -0.76
EPHA4-213ENST00000495693 CHMP3Q9Y3E7 222 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 ATP6V1DQ9Y5K8 247 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 ITGB4P16144 1822 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 SPATA31A1Q5TZJ5 1347 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC171Q6TFL3 1326 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 TJP1Q07157 1748 aa10.3□□□□□ -0.76
EPHA4-213ENST00000495693 PALLDQ8WX93 1383 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 ESPNB1AK53 854 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 ATP5J2-PTCD1G3V325 749 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 EYA2O00167 538 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 A1BGP04217 495 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 WDR4P57081 412 aaKnown RBP10.29□□□□□ -0.76
EPHA4-213ENST00000495693 FOXO4P98177 505 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 IRF5Q13568 498 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 VPS53Q5VIR6 699 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC125Q86Z20 511 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 UNC5CLQ8IV45 518 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 HAUS7Q99871 368 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 SIL1Q9H173 461 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 CEP126Q9P2H0 1117 aa10.29□□□□□ -0.76
EPHA4-213ENST00000495693 ZNF831Q5JPB2 1677 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 TRAK2O60296 914 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 ZFYP08048 801 aaPredicted RBP10.28□□□□□ -0.76
EPHA4-213ENST00000495693 HMGB1P09429 215 aaKnown RBP10.28□□□□□ -0.76
EPHA4-213ENST00000495693 DHX9Q08211 1270 aaKnown RBP10.28□□□□□ -0.76
EPHA4-213ENST00000495693 IFIT5Q13325 482 aaKnown RBP10.28□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC158Q5M9N0 1113 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 TTLL7Q6ZT98 887 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 DNAJC10Q8IXB1 793 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 TMX3Q96JJ7 454 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 CCDC8Q9H0W5 538 aaPredicted RBP10.28□□□□□ -0.76
EPHA4-213ENST00000495693 ATP13A2Q9NQ11 1180 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 DACH1Q9UI36 760 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 CYP46A1Q9Y6A2 500 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 ANKRD36CQ5JPF3 1778 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 SLIT2O94813 1529 aa10.28□□□□□ -0.76
EPHA4-213ENST00000495693 DOT1LQ8TEK3 1739 aa10.27□□□□□ -0.76
EPHA4-213ENST00000495693 ZNF609O15014 1411 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 TFCP2Q12800 502 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 TSGA10IPQ3SY00 556 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 PARP10Q53GL7 1025 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 INTS6LQ5JSJ4 861 aaKnown RBP10.27□□□□□ -0.77
EPHA4-213ENST00000495693 EPHA10Q5JZY3 1008 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 ZSCAN25Q6NSZ9 544 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 MAP4K1Q92918 833 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 ALDH8A1Q9H2A2 487 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-213ENST00000495693 BOLA2Q9H3K6 86 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 GDPD2Q9HCC8 539 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 HELLSQ9NRZ9 838 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 ASAP1Q9ULH1 1129 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 LIMCH1Q9UPQ0 1083 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 ZNF652Q9Y2D9 606 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 SPATA31A5Q5VU36 1347 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 SPATA31A7Q8IWB4 1347 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 SH3TC1Q8TE82 1336 aa10.27□□□□□ -0.77
EPHA4-213ENST00000495693 WDR33Q9C0J8 1336 aaKnown RBP10.27□□□□□ -0.77
EPHA4-213ENST00000495693 JCADQ9P266 1359 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 MED23Q9ULK4 1368 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 ANKRD18BA2A2Z9 1011 aa10.26□□□□□ -0.77
EPHA4-213ENST00000495693 MAP4K4O95819 1239 aaPredicted RBP10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms