RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 NSUN4Q96CB9 384 aaKnown RBP17.61■□□□□ 0.41
SCAP-213ENST00000494938 TNNI2P48788 182 aa17.6■□□□□ 0.41
SCAP-213ENST00000494938 TTLL12Q14166 644 aaPredicted RBP17.6■□□□□ 0.41
SCAP-213ENST00000494938 MAP3K11Q16584 847 aa17.6■□□□□ 0.41
SCAP-213ENST00000494938 ARMC9Q7Z3E5 817 aa17.6■□□□□ 0.41
SCAP-213ENST00000494938 ANGEL1Q9UNK9 670 aaKnown RBP17.6■□□□□ 0.41
SCAP-213ENST00000494938 TRPM7Q96QT4 1865 aa17.6■□□□□ 0.41
SCAP-213ENST00000494938 ARAP2Q8WZ64 1704 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 SSC5DA1L4H1 1573 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 GPR75-ASB3A0A0A6YYF3 556 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 SLC10A3P09131 477 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 NFIAQ12857 509 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 ZFPM1Q8IX07 1006 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 SLF2Q8IX21 1173 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 PIH1D3Q9NQM4 214 aaKnown RBP17.59■□□□□ 0.41
SCAP-213ENST00000494938 TMOD2Q9NZR1 351 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 RAI14Q9P0K7 980 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 LRP2BPQ9P2M1 347 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 FAM198AQ9UFP1 575 aa17.59■□□□□ 0.41
SCAP-213ENST00000494938 PPP1R12BO60237 982 aaPredicted RBP17.58■□□□□ 0.4
SCAP-213ENST00000494938 SMARCA5O60264 1052 aaPredicted RBP17.58■□□□□ 0.4
SCAP-213ENST00000494938 IFIT2P09913 472 aaKnown RBP17.58■□□□□ 0.4
SCAP-213ENST00000494938 MAP2K1Q02750 393 aaPredicted RBP17.58■□□□□ 0.4
SCAP-213ENST00000494938 NOGQ13253 232 aa17.58■□□□□ 0.4
SCAP-213ENST00000494938 RASAL3Q86YV0 1011 aa17.58■□□□□ 0.4
SCAP-213ENST00000494938 FAM151AQ8WW52 585 aa17.58■□□□□ 0.4
SCAP-213ENST00000494938 NDUFB9Q9Y6M9 179 aa17.58■□□□□ 0.4
SCAP-213ENST00000494938 MROH7-TTC4A0A0A0MT08 1334 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 FOXN1O15353 648 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 LDHCP07864 332 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 BTDP43251 543 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 RHBDL3P58872 404 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 GSTO1P78417 241 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 KIF23Q02241 960 aaPredicted RBP17.57■□□□□ 0.4
SCAP-213ENST00000494938 IDI2Q9BXS1 227 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 LRRCC1Q9C099 1032 aa17.57■□□□□ 0.4
SCAP-213ENST00000494938 SUPT16HQ9Y5B9 1047 aaKnown RBP17.57■□□□□ 0.4
SCAP-213ENST00000494938 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
SCAP-213ENST00000494938 TCP10Q12799 353 aa17.56■□□□□ 0.4
SCAP-213ENST00000494938 CLMNQ96JQ2 1002 aa17.56■□□□□ 0.4
SCAP-213ENST00000494938 BCL11AQ9H165 835 aa17.56■□□□□ 0.4
SCAP-213ENST00000494938 ANTXR1Q9H6X2 564 aa17.56■□□□□ 0.4
SCAP-213ENST00000494938 UNCXA6NJT0 531 aa17.55■□□□□ 0.4
SCAP-213ENST00000494938 IGSF3O75054 1194 aa17.55■□□□□ 0.4
SCAP-213ENST00000494938 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.55■□□□□ 0.4
SCAP-213ENST00000494938 SLC10A4Q96EP9 437 aa17.55■□□□□ 0.4
SCAP-213ENST00000494938 CSRNP1Q96S65 589 aa17.55■□□□□ 0.4
SCAP-213ENST00000494938 PAPPA2Q9BXP8 1791 aa17.54■□□□□ 0.4
SCAP-213ENST00000494938 IREB2P48200 963 aaKnown RBP17.54■□□□□ 0.4
SCAP-213ENST00000494938 RGS3P49796 1198 aa17.54■□□□□ 0.4
SCAP-213ENST00000494938 PPP4CP60510 307 aa17.54■□□□□ 0.4
SCAP-213ENST00000494938 NAA16Q6N069 864 aaPredicted RBP17.54■□□□□ 0.4
SCAP-213ENST00000494938 SH3BP5LQ7L8J4 393 aa17.54■□□□□ 0.4
SCAP-213ENST00000494938 ADGRA1Q86SQ6 560 aa17.54■□□□□ 0.4
SCAP-213ENST00000494938 DDX4Q9NQI0 724 aaKnown RBP17.54■□□□□ 0.4
SCAP-213ENST00000494938 ENTPD3O75355 529 aa17.53■□□□□ 0.4
SCAP-213ENST00000494938 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
SCAP-213ENST00000494938 ATP5JP18859 108 aa17.53■□□□□ 0.4
SCAP-213ENST00000494938 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.53■□□□□ 0.4
SCAP-213ENST00000494938 EXOC6Q8TAG9 804 aa17.53■□□□□ 0.4
SCAP-213ENST00000494938 NPM3O75607 178 aaKnown RBP17.52■□□□□ 0.4
SCAP-213ENST00000494938 MAP3K9P80192 1104 aa17.52■□□□□ 0.4
SCAP-213ENST00000494938 SPRYD7Q5W111 196 aa17.52■□□□□ 0.4
SCAP-213ENST00000494938 MIGA2Q7L4E1 593 aa17.52■□□□□ 0.4
SCAP-213ENST00000494938 ANKRD13AQ8IZ07 590 aa17.52■□□□□ 0.4
SCAP-213ENST00000494938 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.4
SCAP-213ENST00000494938 AIDAQ96BJ3 306 aa17.52■□□□□ 0.4
SCAP-213ENST00000494938 RFX7Q2KHR2 1363 aa17.52■□□□□ 0.39
SCAP-213ENST00000494938 IDH1O75874 414 aaKnown RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 GJA5P36382 358 aa17.51■□□□□ 0.39
SCAP-213ENST00000494938 CTCFP49711 727 aaPredicted RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 MKRN3Q13064 507 aaKnown RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 HDAC1Q13547 482 aaPredicted RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 AAMPQ13685 434 aa17.51■□□□□ 0.39
SCAP-213ENST00000494938 SH3RF3Q8TEJ3 882 aaPredicted RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 EDC3Q96F86 508 aaKnown RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 BOLA2Q9H3K6 86 aa17.51■□□□□ 0.39
SCAP-213ENST00000494938 RPAP1Q9BWH6 1393 aaPredicted RBP17.51■□□□□ 0.39
SCAP-213ENST00000494938 DDTLA6NHG4 134 aaPredicted RBP17.5■□□□□ 0.39
SCAP-213ENST00000494938 HSPA8P11142 646 aaKnown RBP17.5■□□□□ 0.39
SCAP-213ENST00000494938 CYP7A1P22680 504 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 TM4SF4P48230 202 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 MAP3K10Q02779 954 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 MAGEB6Q8N7X4 407 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 HOOK2Q96ED9 719 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 HAUS7Q99871 368 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 AATFQ9NY61 560 aaKnown RBP eCLIP17.5■□□□□ 0.39
SCAP-213ENST00000494938 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.5■□□□□ 0.39
SCAP-213ENST00000494938 ZNF112Q9UJU3 913 aa17.5■□□□□ 0.39
SCAP-213ENST00000494938 GOLIM4O00461 696 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 BAG3O95817 575 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 SLURP2P0DP57 97 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 DYNLL1P63167 89 aaKnown RBP17.49■□□□□ 0.39
SCAP-213ENST00000494938 MAP3K12Q12852 859 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 PICALMQ13492 652 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 VGLL4Q14135 290 aa17.49■□□□□ 0.39
SCAP-213ENST00000494938 TTF1Q15361 905 aaPredicted RBP17.49■□□□□ 0.39
SCAP-213ENST00000494938 COL13A1Q5TAT6 717 aaPredicted RBP17.49■□□□□ 0.39
SCAP-213ENST00000494938 REM2Q8IYK8 340 aaPredicted RBP17.49■□□□□ 0.39
SCAP-213ENST00000494938 WNK4Q96J92 1243 aa17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms