RNA–Protein interactions for RNA: ENST00000494841.1

RPGR-210, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 1 (best)

Gene RPGR, Length 653 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-210ENST00000494841 FAM196AQ6ZSG2 479 aa9.81□□□□□ -0.84
RPGR-210ENST00000494841 SYTL4Q96C24 671 aaPredicted RBP9.81□□□□□ -0.84
RPGR-210ENST00000494841 THUMPD2Q9BTF0 503 aaKnown RBP9.81□□□□□ -0.84
RPGR-210ENST00000494841 SBF2Q86WG5 1849 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 MAP3K5Q99683 1374 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 PTCD1O75127 700 aaKnown RBP9.8□□□□□ -0.84
RPGR-210ENST00000494841 NPAS3Q8IXF0 933 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 TRIM22Q8IYM9 498 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 RHPN1Q8TCX5 695 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 DCAF5Q96JK2 942 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 ZIC5Q96T25 663 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 SEPT3Q9UH03 358 aa9.8□□□□□ -0.84
RPGR-210ENST00000494841 GPC6Q9Y625 555 aaPredicted RBP9.8□□□□□ -0.84
RPGR-210ENST00000494841 KDM6AO15550 1401 aaPredicted RBP9.8□□□□□ -0.84
RPGR-210ENST00000494841 ITGB4P16144 1822 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 SCN11AQ9UI33 1791 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 TERTO14746 1132 aaKnown RBP9.79□□□□□ -0.84
RPGR-210ENST00000494841 HSP90AB1P08238 724 aaKnown RBP9.79□□□□□ -0.84
RPGR-210ENST00000494841 DBN1Q16643 649 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 RTN1Q16799 776 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 PGBD3Q8N328 593 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 RTF1Q92541 710 aaKnown RBP9.79□□□□□ -0.84
RPGR-210ENST00000494841 ZNF837Q96EG3 531 aaPredicted RBP9.79□□□□□ -0.84
RPGR-210ENST00000494841 MYO19Q96H55 970 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 DOT1LQ8TEK3 1739 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 TOGARAM1Q9Y4F4 1720 aa9.79□□□□□ -0.84
RPGR-210ENST00000494841 PLEKHG2Q9H7P9 1386 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 A0A1W2PNR3 127 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 CABP4P57796 275 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 ARSJQ5FYB0 599 aaPredicted RBP9.78□□□□□ -0.84
RPGR-210ENST00000494841 BICDL1Q6ZP65 573 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 HOMEZQ8IX15 550 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 PIGBQ92521 554 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 NUCKS1Q9H1E3 243 aaKnown RBP9.78□□□□□ -0.84
RPGR-210ENST00000494841 MIS18AQ9NYP9 233 aa9.78□□□□□ -0.84
RPGR-210ENST00000494841 ERVV-2B6SEH9 535 aa9.77□□□□□ -0.85
RPGR-210ENST00000494841 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
RPGR-210ENST00000494841 BRD1O95696 1058 aa9.77□□□□□ -0.85
RPGR-210ENST00000494841 UBAP2LQ14157 1087 aaKnown RBP9.77□□□□□ -0.85
RPGR-210ENST00000494841 LBRQ14739 615 aaKnown RBP9.77□□□□□ -0.85
RPGR-210ENST00000494841 NANOS1Q8WY41 292 aaKnown RBP9.77□□□□□ -0.85
RPGR-210ENST00000494841 SAP130Q9H0E3 1048 aa9.77□□□□□ -0.85
RPGR-210ENST00000494841 H7C1W4 665 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 APBA3O96018 575 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 PDIA4P13667 645 aaKnown RBP9.76□□□□□ -0.85
RPGR-210ENST00000494841 TEFQ10587 303 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 SLC39A6Q13433 755 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 NAA30Q147X3 362 aaPredicted RBP9.76□□□□□ -0.85
RPGR-210ENST00000494841 EFHC2Q5JST6 749 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 COX20Q5RI15 118 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 GMCL1Q96IK5 515 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 HSH2DQ96JZ2 352 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 SLC52A2Q9HAB3 445 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.76□□□□□ -0.85
RPGR-210ENST00000494841 TMOD3Q9NYL9 352 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 ASAP1Q9ULH1 1129 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 LRFN2Q9ULH4 789 aa9.76□□□□□ -0.85
RPGR-210ENST00000494841 LAS1LQ9Y4W2 734 aaKnown RBP9.76□□□□□ -0.85
RPGR-210ENST00000494841 CEMIPQ8WUJ3 1361 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 BCL9O00512 1426 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 ADAMTS7Q9UKP4 1686 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 CDC14CA4D256 554 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 KCNQ3O43525 872 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 HNRNPUQ00839 825 aaKnown RBP eCLIP9.75□□□□□ -0.85
RPGR-210ENST00000494841 LMOD3Q0VAK6 560 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 C16orf46Q6P387 395 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 NLRP8Q86W28 1048 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 VWA5B2Q8N398 1253 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 SUSD3Q96L08 255 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 KLK14Q9P0G3 267 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 BTAF1O14981 1849 aa9.75□□□□□ -0.85
RPGR-210ENST00000494841 NHSQ6T4R5 1651 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 BTBD11A6QL63 1104 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 TNFRSF10BO14763 440 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 VSIG8P0DPA2 414 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 KCNQ4P56696 695 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 NFX1Q12986 1120 aaKnown RBP9.74□□□□□ -0.85
RPGR-210ENST00000494841 DGKZQ13574 1117 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 TAF7Q15545 349 aaPredicted RBP9.74□□□□□ -0.85
RPGR-210ENST00000494841 LRRC69Q6ZNQ3 347 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 DEFB132Q7Z7B7 95 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 ZNF280CQ8ND82 737 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 ZNF775Q96BV0 537 aaPredicted RBP9.74□□□□□ -0.85
RPGR-210ENST00000494841 YTHDC1Q96MU7 727 aaKnown RBP9.74□□□□□ -0.85
RPGR-210ENST00000494841 ATG3Q9NT62 314 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 BCS1LQ9Y276 419 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 ERBB4Q15303 1308 aa9.74□□□□□ -0.85
RPGR-210ENST00000494841 SIPA1L3O60292 1781 aaPredicted RBP9.73□□□□□ -0.85
RPGR-210ENST00000494841 CCDC27Q2M243 656 aa9.73□□□□□ -0.85
RPGR-210ENST00000494841 LCE2CQ5TA81 110 aa9.73□□□□□ -0.85
RPGR-210ENST00000494841 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
RPGR-210ENST00000494841 GTPBP3Q969Y2 492 aaKnown RBP9.73□□□□□ -0.85
RPGR-210ENST00000494841 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
RPGR-210ENST00000494841 SAMD5Q5TGI4 173 aa9.72□□□□□ -0.85
RPGR-210ENST00000494841 GTF3C2Q8WUA4 911 aaPredicted RBP9.72□□□□□ -0.85
RPGR-210ENST00000494841 TNS1Q9HBL0 1735 aaKnown RBP9.72□□□□□ -0.85
RPGR-210ENST00000494841 CHL1O00533 1208 aa9.71□□□□□ -0.86
RPGR-210ENST00000494841 SF3B2Q13435 895 aaKnown RBP9.71□□□□□ -0.86
RPGR-210ENST00000494841 EZH2Q15910 746 aaKnown RBP9.71□□□□□ -0.86
RPGR-210ENST00000494841 HIF1AQ16665 826 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms