RNA–Protein interactions for RNA: ENST00000494815.1

TSPAN4-212, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,187 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-212ENST00000494815 RIOK1Q9BRS2 568 aaKnown RBP21.79■■□□□ 1.08
TSPAN4-212ENST00000494815 PRC1O43663 620 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 PRPF40AO75400 957 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 UFL1O94874 794 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 ZSCAN22P10073 491 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 PDE6BP35913 854 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 WDR66Q8TBY9 1149 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 NOL7Q9UMY1 257 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 LRRC37AA6NMS7 1700 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 SRGNP10124 158 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 NPR1P16066 1061 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 CHAF1AQ13111 956 aaPredicted RBP21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 SLC51AQ86UW1 340 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 ZNF384Q8TF68 577 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 LLPHQ9BRT6 129 aaKnown RBP21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 PDCL3Q9H2J4 239 aa21.78■■□□□ 1.08
TSPAN4-212ENST00000494815 PRKAB2O43741 272 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 TDO2P48775 406 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 MECOMQ03112 1051 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 APOBRQ0VD83 1088 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 FOXD4L5Q5VV16 416 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 SP8Q8IXZ3 490 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 FOXD4L4Q8WXT5 416 aaPredicted RBP21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 MAST2Q6P0Q8 1798 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 TIAM2Q8IVF5 1701 aa21.77■■□□□ 1.08
TSPAN4-212ENST00000494815 PPEF1O14829 653 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-212ENST00000494815 ZNF500O60304 480 aaPredicted RBP21.77■■□□□ 1.07
TSPAN4-212ENST00000494815 SLC15A2Q16348 729 aa21.77■■□□□ 1.07
TSPAN4-212ENST00000494815 CHST3Q7LGC8 479 aa21.77■■□□□ 1.07
TSPAN4-212ENST00000494815 ANTXR2P58335 489 aa21.76■■□□□ 1.07
TSPAN4-212ENST00000494815 SCRN1Q12765 414 aa21.76■■□□□ 1.07
TSPAN4-212ENST00000494815 CNNM2Q9H8M5 875 aa21.76■■□□□ 1.07
TSPAN4-212ENST00000494815 PRDX5P30044 214 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 EZH2Q15910 746 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 ATP6V0A2Q9Y487 856 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 ATP6V1DQ9Y5K8 247 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 PDIA3P30101 505 aaKnown RBP21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 ALDH1B1P30837 517 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 EN1Q05925 392 aaPredicted RBP21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 LRSAM1Q6UWE0 723 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 TBC1D16Q8TBP0 767 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 STK32BQ9NY57 414 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 MTMR6Q9Y217 621 aa21.75■■□□□ 1.07
TSPAN4-212ENST00000494815 DUOX1Q9NRD9 1551 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 AKNAD1Q5T1N1 836 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 LARP1BQ659C4 914 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 GIMAP6Q6P9H5 292 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 RBM27Q9P2N5 1060 aaKnown RBP21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 LTBP1Q14766 1721 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 F13A1P00488 732 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 IL1R1P14778 569 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 SMARCC2Q8TAQ2 1214 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 STAG1Q8WVM7 1258 aa21.74■■□□□ 1.07
TSPAN4-212ENST00000494815 TMEM87BQ96K49 555 aa21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 KRT23Q9C075 422 aa21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 RNF41Q9H4P4 317 aaPredicted RBP21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 CD209Q9NNX6 404 aa21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 POLLQ9UGP5 575 aa21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 NEDD4P46934 1319 aa21.73■■□□□ 1.07
TSPAN4-212ENST00000494815 RBM10P98175 930 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 MSL1Q68DK7 614 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 MFSD6Q6ZSS7 791 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 DZIP1Q86YF9 867 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 MASTLQ96GX5 879 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 ANAPC4Q9UJX5 808 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 ANGEL1Q9UNK9 670 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 CCDC88AQ3V6T2 1871 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 LDHBP07195 334 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 HMGN5P82970 282 aaKnown RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 SDR42E1Q8WUS8 393 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 GPR101Q96P66 508 aaPredicted RBP21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 TMEM63CQ9P1W3 806 aa21.72■■□□□ 1.07
TSPAN4-212ENST00000494815 B4E1Z4 1266 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 DYNLL1P63167 89 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 KIF3AQ9Y496 699 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 KIAA1551Q9HCM1 1747 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 MBD3O95983 291 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 CTDSPL2Q05D32 466 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 PPARAQ07869 468 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 CYB5R4Q7L1T6 521 aa21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 NSUN7Q8NE18 718 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 CRNKL1Q9BZJ0 848 aaKnown RBP21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 GPHNQ9NQX3 736 aaPredicted RBP21.71■■□□□ 1.07
TSPAN4-212ENST00000494815 JAK2O60674 1132 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 GSTO1P78417 241 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 ZKSCAN5Q9Y2L8 839 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 CHD4Q14839 1912 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 KLF18A0A0U1RQI7 1052 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 VPS37CA5D8V6 355 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 C6orf229H3BNL8 230 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 SH2B2O14492 632 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 DHX16O60231 1041 aaKnown RBP21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 MTA3Q9BTC8 594 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 NAP1L2Q9ULW6 460 aaPredicted RBP21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 JAG2Q9Y219 1238 aa21.7■■□□□ 1.06
TSPAN4-212ENST00000494815 COL11A2P13942 1736 aaPredicted RBP21.69■■□□□ 1.06
TSPAN4-212ENST00000494815 SYCE3A1L190 88 aa21.68■■□□□ 1.06
TSPAN4-212ENST00000494815 DTNBO60941 627 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms