RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 HPS5Q9UPZ3 1129 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 SNCAIPQ9Y6H5 919 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 ATAD5Q96QE3 1844 aa14.49□□□□□ -0.09
VTI1A-208ENST00000494728 SIPA1L1O43166 1804 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 SALL1Q9NSC2 1324 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 PNMA6EA0A0J9YXQ4 647 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 TESPA1A2RU30 521 aaPredicted RBP14.48□□□□□ -0.09
VTI1A-208ENST00000494728 UNCXA6NJT0 531 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 TNNI2P48788 182 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 TIMM10P62072 90 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 HNRNPUQ00839 825 aaKnown RBP eCLIP14.48□□□□□ -0.09
VTI1A-208ENST00000494728 TFCP2Q12800 502 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 CRHR2Q13324 411 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 CDC42EP5Q6NZY7 148 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 FAM83AQ86UY5 434 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 TMEM57Q8N5G2 664 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 BRI3BPQ8WY22 251 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 MRIQ9BWK5 157 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 FOCADQ5VW36 1801 aa14.48□□□□□ -0.09
VTI1A-208ENST00000494728 ATRNL1Q5VV63 1379 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 A0A1B0GUL7 405 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 FKTNO75072 461 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 GNAI3P08754 354 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 FKBP1CQ5VVH2 108 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 PI16Q6UXB8 463 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 ZNF384Q8TF68 577 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 ZKSCAN4Q969J2 545 aaPredicted RBP14.47□□□□□ -0.09
VTI1A-208ENST00000494728 OTUD5Q96G74 571 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 WRNIP1Q96S55 665 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 FAM198AQ9UFP1 575 aa14.47□□□□□ -0.09
VTI1A-208ENST00000494728 ALDH1A1P00352 501 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 MAP3K9P80192 1104 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 MLLT1Q03111 559 aaPredicted RBP14.46□□□□□ -0.09
VTI1A-208ENST00000494728 TCP10Q12799 353 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 ZFPM1Q8IX07 1006 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 XAGE2Q96GT9 111 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 TMOD2Q9NZR1 351 aa14.46□□□□□ -0.09
VTI1A-208ENST00000494728 GAKO14976 1311 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 SPDYE5A6NIY4 337 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 SEMA3EO15041 775 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 GNAI2P04899 355 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 LDHBP07195 334 aaKnown RBP14.45□□□□□ -0.1
VTI1A-208ENST00000494728 SLURP2P0DP57 97 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 RLBP1P12271 317 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 INPP5BP32019 993 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 INHBEP58166 350 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 DIEXFQ68CQ4 756 aaKnown RBP14.45□□□□□ -0.1
VTI1A-208ENST00000494728 MIGA2Q7L4E1 593 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 FAM43AQ8N2R8 423 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 C1orf115Q9H7X2 142 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 GNL3LQ9NVN8 582 aaKnown RBP14.45□□□□□ -0.1
VTI1A-208ENST00000494728 DENND2AQ9ULE3 1009 aa14.45□□□□□ -0.1
VTI1A-208ENST00000494728 PDS5AQ29RF7 1337 aaKnown RBP14.44□□□□□ -0.1
VTI1A-208ENST00000494728 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 ZBTB22O15209 634 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 CCL15Q16663 113 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 CD99L2Q8TCZ2 262 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 FAM151AQ8WW52 585 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 CSADQ9Y600 493 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 MGAMO43451 1857 aa14.44□□□□□ -0.1
VTI1A-208ENST00000494728 IRF6O14896 467 aa14.43□□□□□ -0.1
VTI1A-208ENST00000494728 IPO8O15397 1037 aaKnown RBP14.43□□□□□ -0.1
VTI1A-208ENST00000494728 ZKSCAN2Q63HK3 967 aa14.43□□□□□ -0.1
VTI1A-208ENST00000494728 FBXO46Q6PJ61 603 aaPredicted RBP14.43□□□□□ -0.1
VTI1A-208ENST00000494728 SH3BP5LQ7L8J4 393 aa14.43□□□□□ -0.1
VTI1A-208ENST00000494728 OTOP1Q7RTM1 612 aa14.43□□□□□ -0.1
VTI1A-208ENST00000494728 DDX4Q9NQI0 724 aaKnown RBP14.43□□□□□ -0.1
VTI1A-208ENST00000494728 HDAC5Q9UQL6 1122 aa14.43□□□□□ -0.1
VTI1A-208ENST00000494728 POLA2Q14181 598 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 PKN2Q16513 984 aaKnown RBP14.42□□□□□ -0.1
VTI1A-208ENST00000494728 USP40Q9NVE5 1235 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 HMG20BQ9P0W2 317 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 ABCF2Q9UG63 623 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 TRIM17Q9Y577 477 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 CEP290O15078 2479 aa14.42□□□□□ -0.1
VTI1A-208ENST00000494728 WDHD1O75717 1129 aaPredicted RBP14.41□□□□□ -0.1
VTI1A-208ENST00000494728 MCAMP43121 646 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 RGS3P49796 1198 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 GTF2A2P52657 109 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 MECOMQ03112 1051 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 PPIL2Q13356 520 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 MVPQ14764 893 aaKnown RBP14.41□□□□□ -0.1
VTI1A-208ENST00000494728 TBC1D9Q6ZT07 1266 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 ERO1BQ86YB8 467 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 NEUROD6Q96NK8 337 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 ZNF341Q9BYN7 854 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 ZNF112Q9UJU3 913 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 MROH7-TTC4A0A0A0MT08 1334 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 ZBED9Q6R2W3 1325 aa14.41□□□□□ -0.1
VTI1A-208ENST00000494728 LOC285556D6RIA3 1793 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 ARID4AP29374 1257 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-208ENST00000494728 BTDP43251 543 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 MOGSQ13724 837 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 TAF1CQ15572 869 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-208ENST00000494728 DCAF15Q66K64 600 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 DZIP1Q86YF9 867 aaKnown RBP14.4□□□□□ -0.1
VTI1A-208ENST00000494728 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.4□□□□□ -0.1
VTI1A-208ENST00000494728 IDI2Q9BXS1 227 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 AKAP2Q9Y2D5 859 aa14.4□□□□□ -0.1
VTI1A-208ENST00000494728 DDTLA6NHG4 134 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms