RNA–Protein interactions for RNA: ENST00000494674.1

PRPF4B-209, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 5

Gene PRPF4B, Length 1,727 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-209ENST00000494674 B4E1Z4 1266 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 SH2B2O14492 632 aaPredicted RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 HOXA10P31260 410 aaPredicted RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 CTDSPL2Q05D32 466 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 L1TD1Q5T7N2 865 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 C15orf52Q6ZUT6 534 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 NSUN4Q96CB9 384 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 DDX11Q96FC9 970 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 INCENPQ9NQS7 918 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 XDHP47989 1333 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 MAGEB6P1A0A0J9YX57 407 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 KLF18A0A0U1RQI7 1052 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 FDPSP14324 419 aaKnown RBP12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 ST5P78524 1137 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 RESTQ13127 1097 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 SENP2Q9HC62 589 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 LEMD3Q9Y2U8 911 aa12.51□□□□□ -0.41
PRPF4B-209ENST00000494674 GOLGA8BA8MQT2 603 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 FIBPO43427 364 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 HMGN5P82970 282 aaKnown RBP12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 MECOMQ03112 1051 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 TRDNQ13061 729 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 AKNAD1Q5T1N1 836 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 NAA16Q6N069 864 aaPredicted RBP12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 FAM173BQ6P4H8 233 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 IGDCC4Q8TDY8 1250 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 STAG1Q8WVM7 1258 aa12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 RPGRQ92834 1020 aaKnown RBP12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 ANGEL1Q9UNK9 670 aaKnown RBP12.5□□□□□ -0.41
PRPF4B-209ENST00000494674 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 PRDX5P30044 214 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 TDO2P48775 406 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 MRE11P49959 708 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 DYNLL1P63167 89 aaKnown RBP12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 GPSM2P81274 684 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 COL23A1Q86Y22 540 aaPredicted RBP12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 SDR42E1Q8WUS8 393 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 NACAP1Q9BZK3 213 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 GRPEL1Q9HAV7 217 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 LY9Q9HBG7 655 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 ANAPC4Q9UJX5 808 aa12.49□□□□□ -0.41
PRPF4B-209ENST00000494674 NAV1Q8NEY1 1877 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 SMIM22K7EJ46 135 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 TTC6Q86TZ1 520 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 SGMS1Q86VZ5 419 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 TDRD7Q8NHU6 1098 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 TMEM87BQ96K49 555 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 GPR101Q96P66 508 aaPredicted RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 PANK2Q9BZ23 570 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 ZSWIM5Q9P217 1185 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 ANKIB1Q9P2G1 1089 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 NID2Q14112 1375 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 KDM4AO75164 1064 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 APBA3O96018 575 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 HMGB2P26583 209 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 UBE2HP62256 183 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 PPARAQ07869 468 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 CHAF1AQ13111 956 aaPredicted RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 APOA5Q6Q788 366 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 RBM17Q96I25 401 aaKnown RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 CRAMP1Q96RY5 1269 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 BRIP1Q9BX63 1249 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 CNNM2Q9H8M5 875 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 NAP1L2Q9ULW6 460 aaPredicted RBP12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 ELP1O95163 1332 aa12.48□□□□□ -0.41
PRPF4B-209ENST00000494674 PPFIA3O75145 1194 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 LIFRP42702 1097 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 TMED8Q6PL24 325 aaPredicted RBP12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 MFSD6Q6ZSS7 791 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 CHMP4CQ96CF2 233 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 KRT23Q9C075 422 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 PODXL2Q9NZ53 605 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 JAG2Q9Y219 1238 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 MYH6P13533 1939 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 FOCADQ5VW36 1801 aa12.47□□□□□ -0.41
PRPF4B-209ENST00000494674 BBOX1O75936 387 aa12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 ADD1P35611 737 aaKnown RBP12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 KRT85P78386 507 aa12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 GRIK5Q16478 980 aa12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 GIMAP6Q6P9H5 292 aa12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 RGS17Q9UGC6 210 aaPredicted RBP12.46□□□□□ -0.41
PRPF4B-209ENST00000494674 UFL1O94874 794 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 FGRP09769 529 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 RXRBP28702 533 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 TMEM67Q5HYA8 995 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 ILDR1Q86SU0 546 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 FAM217BQ9NTX9 383 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 KIF3AQ9Y496 699 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 ZNF646O15015 1829 aaPredicted RBP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 CYP2D7A0A087X1C5 515 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 SYCE3A1L190 88 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 H3BQV1 296 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 DHX16O60231 1041 aaKnown RBP12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 IGSF3O75054 1194 aa12.45□□□□□ -0.42
PRPF4B-209ENST00000494674 IL1R1P14778 569 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms