RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 CNPY2Q9Y2B0 182 aa19.47■□□□□ 0.71
ATG4B-225ENST00000494465 ATP6V1DQ9Y5K8 247 aa19.47■□□□□ 0.71
ATG4B-225ENST00000494465 AKNAD1Q5T1N1 836 aa19.47■□□□□ 0.71
ATG4B-225ENST00000494465 USP48Q86UV5 1035 aa19.47■□□□□ 0.71
ATG4B-225ENST00000494465 DDX11Q96FC9 970 aa19.47■□□□□ 0.71
ATG4B-225ENST00000494465 PTPDC1A2A3K4 754 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 FLAD1Q8NFF5 587 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 STAG1Q8WVM7 1258 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 JAG2Q9Y219 1238 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 KLF18A0A0U1RQI7 1052 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 SH2B2O14492 632 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-225ENST00000494465 BRIP1Q9BX63 1249 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
ATG4B-225ENST00000494465 NAP1L2Q9ULW6 460 aaPredicted RBP19.46■□□□□ 0.71
ATG4B-225ENST00000494465 ANGEL1Q9UNK9 670 aaKnown RBP19.46■□□□□ 0.71
ATG4B-225ENST00000494465 COL11A2P13942 1736 aaPredicted RBP19.45■□□□□ 0.7
ATG4B-225ENST00000494465 IGDCC4Q8TDY8 1250 aa19.45■□□□□ 0.7
ATG4B-225ENST00000494465 GADD45BO75293 160 aaPredicted RBP19.44■□□□□ 0.7
ATG4B-225ENST00000494465 UFL1O94874 794 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 ATP2B4P23634 1241 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 HMGN5P82970 282 aaKnown RBP19.44■□□□□ 0.7
ATG4B-225ENST00000494465 DNM1Q05193 864 aaKnown RBP19.44■□□□□ 0.7
ATG4B-225ENST00000494465 ZSWIM5Q9P217 1185 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 CAVIN1Q6NZI2 390 aaKnown RBP19.44■□□□□ 0.7
ATG4B-225ENST00000494465 ZNF804AQ7Z570 1209 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 FERMT3Q86UX7 667 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 TMEM87BQ96K49 555 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 SENP2Q9HC62 589 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 ANAPC4Q9UJX5 808 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 GGA1Q9UJY5 639 aa19.44■□□□□ 0.7
ATG4B-225ENST00000494465 GOLGA8BA8MQT2 603 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 NCLP19338 710 aaKnown RBP19.43■□□□□ 0.7
ATG4B-225ENST00000494465 PPARAQ07869 468 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 TMED8Q6PL24 325 aaPredicted RBP19.43■□□□□ 0.7
ATG4B-225ENST00000494465 MFSD6Q6ZSS7 791 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 CNNM2Q9H8M5 875 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 SMIM22K7EJ46 135 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 SRGNP10124 158 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 POLLQ9UGP5 575 aa19.43■□□□□ 0.7
ATG4B-225ENST00000494465 KDM4AO75164 1064 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 MBD3O95983 291 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 MMP10P09238 476 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 FDPSP14324 419 aaKnown RBP19.42■□□□□ 0.7
ATG4B-225ENST00000494465 GAS2L3Q86XJ1 694 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 TBC1D16Q8TBP0 767 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 WDR66Q8TBY9 1149 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 KRT23Q9C075 422 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 LY9Q9HBG7 655 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 FAM184AQ8NB25 1140 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 CHMP4CQ96CF2 233 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 CD209Q9NNX6 404 aa19.42■□□□□ 0.7
ATG4B-225ENST00000494465 RBM27Q9P2N5 1060 aaKnown RBP19.42■□□□□ 0.7
ATG4B-225ENST00000494465 GOLGA6L3A6NEY3 463 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 IL1R1P14778 569 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 GRIK5Q16478 980 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 SPTY2D1Q68D10 685 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-225ENST00000494465 FAM173BQ6P4H8 233 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 GIMAP6Q6P9H5 292 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 TMC4Q7Z404 712 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 SGMS1Q86VZ5 419 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 RAB11FIP4Q86YS3 637 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 SP8Q8IXZ3 490 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 AATFQ9NY61 560 aaKnown RBP eCLIP19.41■□□□□ 0.7
ATG4B-225ENST00000494465 TMEM63CQ9P1W3 806 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 LAMB1P07942 1786 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 MYH15Q9Y2K3 1946 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 PPEF1O14829 653 aaPredicted RBP19.41■□□□□ 0.7
ATG4B-225ENST00000494465 RESTQ13127 1097 aa19.41■□□□□ 0.7
ATG4B-225ENST00000494465 MYH2Q9UKX2 1941 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 FIBPO43427 364 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 IGSF3O75054 1194 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 PPFIA3O75145 1194 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 LIFRP42702 1097 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 ZSCAN23Q3MJ62 389 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 APOA5Q6Q788 366 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 ANO8Q9HCE9 1232 aaPredicted RBP19.4■□□□□ 0.7
ATG4B-225ENST00000494465 DUOX1Q9NRD9 1551 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 MINDY4BA8MYZ0 360 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 MSL1Q68DK7 614 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 ATP6V0A2Q9Y487 856 aa19.4■□□□□ 0.7
ATG4B-225ENST00000494465 CYP2D7A0A087X1C5 515 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 LDHBP07195 334 aaKnown RBP19.39■□□□□ 0.69
ATG4B-225ENST00000494465 NPR1P16066 1061 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 TMEM67Q5HYA8 995 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 DZIP1Q86YF9 867 aaKnown RBP19.39■□□□□ 0.69
ATG4B-225ENST00000494465 CAMKK2Q96RR4 588 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 RNF41Q9H4P4 317 aaPredicted RBP19.39■□□□□ 0.69
ATG4B-225ENST00000494465 PARP3Q9Y6F1 533 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 DHX16O60231 1041 aaKnown RBP19.39■□□□□ 0.69
ATG4B-225ENST00000494465 ZNF445P59923 1031 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 CTR9Q6PD62 1173 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 STK11IPQ8N1F8 1099 aa19.39■□□□□ 0.69
ATG4B-225ENST00000494465 ISY1Q9ULR0 285 aaKnown RBP19.39■□□□□ 0.69
ATG4B-225ENST00000494465 H3BQV1 296 aa19.38■□□□□ 0.69
ATG4B-225ENST00000494465 EZH2Q15910 746 aaKnown RBP19.38■□□□□ 0.69
ATG4B-225ENST00000494465 RRP12Q5JTH9 1297 aaKnown RBP19.38■□□□□ 0.69
ATG4B-225ENST00000494465 IFFO2Q5TF58 517 aa19.38■□□□□ 0.69
ATG4B-225ENST00000494465 DCP1AQ9NPI6 582 aaPredicted RBP19.38■□□□□ 0.69
ATG4B-225ENST00000494465 KIF3AQ9Y496 699 aa19.38■□□□□ 0.69
ATG4B-225ENST00000494465 QSER1Q2KHR3 1735 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms