RNA–Protein interactions for RNA: ENST00000494395.1

ITGB1-217, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 562 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-217ENST00000494395 TRAF5O00463 557 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 SURF6O75683 361 aaKnown RBP10.83□□□□□ -0.68
ITGB1-217ENST00000494395 SCARF1Q14162 830 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 NBPF9Q3BBW0 867 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 VPS37DQ86XT2 251 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 XAGE2Q96GT9 111 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 GLIS2Q9BZE0 524 aaPredicted RBP10.83□□□□□ -0.68
ITGB1-217ENST00000494395 CHMP4BQ9H444 224 aaKnown RBP10.83□□□□□ -0.68
ITGB1-217ENST00000494395 PCDHGA4Q9Y5G9 962 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 PCDHAC2Q9Y5I4 1007 aa10.83□□□□□ -0.68
ITGB1-217ENST00000494395 PDS5AQ29RF7 1337 aaKnown RBP10.83□□□□□ -0.68
ITGB1-217ENST00000494395 ARID4AP29374 1257 aaPredicted RBP10.82□□□□□ -0.68
ITGB1-217ENST00000494395 CHAF1AQ13111 956 aaPredicted RBP10.82□□□□□ -0.68
ITGB1-217ENST00000494395 TNNI3KQ59H18 835 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 CST9Q5W186 159 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 DLK2Q6UY11 383 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 CDC37L1Q7L3B6 337 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 OGFOD1Q8N543 542 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 TBC1D22AQ8WUA7 517 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 HDAC9Q9UKV0 1011 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 FPGT-TNNI3KV9GXZ4 949 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 AOX1Q06278 1338 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 SALL1Q9NSC2 1324 aa10.82□□□□□ -0.68
ITGB1-217ENST00000494395 MYO5AQ9Y4I1 1855 aaKnown RBP10.81□□□□□ -0.68
ITGB1-217ENST00000494395 TMEM88BA6NKF7 163 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 ADM5C9JUS6 153 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 F8W031 263 aaPredicted RBP10.81□□□□□ -0.68
ITGB1-217ENST00000494395 RASGRF1Q13972 1273 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 CFAP100Q494V2 611 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 ANGEL2Q5VTE6 544 aaKnown RBP10.81□□□□□ -0.68
ITGB1-217ENST00000494395 KRT26Q7Z3Y9 468 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 USP48Q86UV5 1035 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 WDR66Q8TBY9 1149 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 SERPINA10Q9UK55 444 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 EXOC6BQ9Y2D4 811 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 SUGT1Q9Y2Z0 365 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 MYH2Q9UKX2 1941 aa10.81□□□□□ -0.68
ITGB1-217ENST00000494395 THSD7BQ9C0I4 1608 aa10.8□□□□□ -0.68
ITGB1-217ENST00000494395 FRAT2O75474 233 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 HDLBPQ00341 1268 aaKnown RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 DCPSQ96C86 337 aaKnown RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 EAF2Q96CJ1 260 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 PRMT6Q96LA8 375 aaPredicted RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 DBNDD2Q9BQY9 259 aa10.8□□□□□ -0.68
ITGB1-217ENST00000494395 MRIQ9BWK5 157 aa10.8□□□□□ -0.68
ITGB1-217ENST00000494395 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
ITGB1-217ENST00000494395 TTF2Q9UNY4 1162 aaKnown RBP10.8□□□□□ -0.68
ITGB1-217ENST00000494395 DOCK2Q92608 1830 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 CNTNAP1P78357 1384 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 TRIM66O15016 1216 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 HMMRO75330 724 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 PRDX5P30044 214 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 OS9Q13438 667 aaPredicted RBP10.79□□□□□ -0.68
ITGB1-217ENST00000494395 DLGAP5Q15398 846 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 ERC1Q8IUD2 1116 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 RHPN1Q8TCX5 695 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 KLRG1Q96E93 195 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 NEUROD6Q96NK8 337 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 CRBNQ96SW2 442 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 GNL3LQ9NVN8 582 aaKnown RBP10.79□□□□□ -0.68
ITGB1-217ENST00000494395 TLR7Q9NYK1 1049 aaKnown RBP10.79□□□□□ -0.68
ITGB1-217ENST00000494395 DBNLQ9UJU6 430 aaKnown RBP10.79□□□□□ -0.68
ITGB1-217ENST00000494395 PCDHB15Q9Y5E8 787 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 GTF3C3Q9Y5Q9 886 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 MAST2Q6P0Q8 1798 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 PAPPA2Q9BXP8 1791 aa10.79□□□□□ -0.68
ITGB1-217ENST00000494395 RASSF10A6NK89 507 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 POTEB2H3BUK9 544 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 CELF2O95319 508 aaKnown RBP10.78□□□□□ -0.68
ITGB1-217ENST00000494395 MCAMP43121 646 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 CRKP46108 304 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 HIC1Q14526 733 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 HSP90AB4PQ58FF6 505 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 PI16Q6UXB8 463 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 SULF1Q8IWU6 871 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 CDCA5Q96FF9 252 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 ZNF512BQ96KM6 892 aaPredicted RBP10.78□□□□□ -0.68
ITGB1-217ENST00000494395 ZDHHC15Q96MV8 337 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 HMG20BQ9P0W2 317 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 SCAF8Q9UPN6 1271 aaKnown RBP10.78□□□□□ -0.68
ITGB1-217ENST00000494395 TLL2Q9Y6L7 1015 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 MAST3O60307 1309 aa10.78□□□□□ -0.68
ITGB1-217ENST00000494395 RAB11FIP3O75154 756 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 MAP2K5Q13163 448 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 APOBEC3HQ6NTF7 200 aaKnown RBP10.77□□□□□ -0.69
ITGB1-217ENST00000494395 HHIPL2Q6UWX4 724 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 SAPCD2Q86UD0 394 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 APOBEC3FQ8IUX4 373 aaKnown RBP10.77□□□□□ -0.69
ITGB1-217ENST00000494395 JMYQ8N9B5 988 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 ZNF384Q8TF68 577 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 EPAS1Q99814 870 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 CCDC8Q9H0W5 538 aaPredicted RBP10.77□□□□□ -0.69
ITGB1-217ENST00000494395 SSC5DA1L4H1 1573 aa10.77□□□□□ -0.69
ITGB1-217ENST00000494395 CLRN2A0PK11 232 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 LDHBP07195 334 aaKnown RBP10.76□□□□□ -0.69
ITGB1-217ENST00000494395 UQCRFS1P1P0C7P4 283 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 FECHP22830 423 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 PTGDRQ13258 359 aa10.76□□□□□ -0.69
ITGB1-217ENST00000494395 ZGPATQ8N5A5 531 aaKnown RBP10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms