RNA–Protein interactions for RNA: ENST00000494317.1

LCN2-207, Transcript of lipocalin 2, humanhuman

TSL 2

Gene LCN2, Length 625 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-207ENST00000494317 TESPA1A2RU30 521 aaPredicted RBP28.33■■■□□ 2.13
LCN2-207ENST00000494317 RASGRF1Q13972 1273 aa28.33■■■□□ 2.13
LCN2-207ENST00000494317 PKN2Q16513 984 aaKnown RBP28.33■■■□□ 2.13
LCN2-207ENST00000494317 HOOK2Q96ED9 719 aa28.33■■■□□ 2.13
LCN2-207ENST00000494317 XAGE2Q96GT9 111 aa28.33■■■□□ 2.13
LCN2-207ENST00000494317 PTPN18Q99952 460 aa28.33■■■□□ 2.13
LCN2-207ENST00000494317 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.33■■■□□ 2.13
LCN2-207ENST00000494317 PNMA6EA0A0J9YXQ4 647 aa28.32■■■□□ 2.12
LCN2-207ENST00000494317 MLLT1Q03111 559 aaPredicted RBP28.32■■■□□ 2.12
LCN2-207ENST00000494317 OTUD7BQ6GQQ9 843 aa28.32■■■□□ 2.12
LCN2-207ENST00000494317 MS4A4AQ96JQ5 239 aa28.32■■■□□ 2.12
LCN2-207ENST00000494317 HPS5Q9UPZ3 1129 aa28.32■■■□□ 2.12
LCN2-207ENST00000494317 FAM151AQ8WW52 585 aa28.31■■■□□ 2.12
LCN2-207ENST00000494317 OTUD5Q96G74 571 aa28.31■■■□□ 2.12
LCN2-207ENST00000494317 WRNIP1Q96S55 665 aa28.31■■■□□ 2.12
LCN2-207ENST00000494317 TCP10Q12799 353 aa28.3■■■□□ 2.12
LCN2-207ENST00000494317 NFIAQ12857 509 aa28.3■■■□□ 2.12
LCN2-207ENST00000494317 CRHR2Q13324 411 aa28.3■■■□□ 2.12
LCN2-207ENST00000494317 MVPQ14764 893 aaKnown RBP28.3■■■□□ 2.12
LCN2-207ENST00000494317 DCAF15Q66K64 600 aa28.3■■■□□ 2.12
LCN2-207ENST00000494317 ZGPATQ8N5A5 531 aaKnown RBP28.3■■■□□ 2.12
LCN2-207ENST00000494317 SNCAIPQ9Y6H5 919 aa28.3■■■□□ 2.12
LCN2-207ENST00000494317 PDS5AQ29RF7 1337 aaKnown RBP28.29■■■□□ 2.12
LCN2-207ENST00000494317 SPDYE5A6NIY4 337 aa28.29■■■□□ 2.12
LCN2-207ENST00000494317 BRI3BPQ8WY22 251 aa28.29■■■□□ 2.12
LCN2-207ENST00000494317 ZKSCAN4Q969J2 545 aaPredicted RBP28.29■■■□□ 2.12
LCN2-207ENST00000494317 NEUROD6Q96NK8 337 aa28.29■■■□□ 2.12
LCN2-207ENST00000494317 USP40Q9NVE5 1235 aa28.29■■■□□ 2.12
LCN2-207ENST00000494317 CCL15-CCL14A0A0B4J2E2 113 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 GTF2A2P52657 109 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 SOX10P56693 466 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 CCL15Q16663 113 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 MIGA2Q7L4E1 593 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 ZNF341Q9BYN7 854 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 ABCF2Q9UG63 623 aa28.28■■■□□ 2.12
LCN2-207ENST00000494317 G3BP1Q13283 466 aaKnown RBP eCLIP28.27■■■□□ 2.12
LCN2-207ENST00000494317 FBXO46Q6PJ61 603 aaPredicted RBP28.27■■■□□ 2.12
LCN2-207ENST00000494317 DZIP1Q86YF9 867 aaKnown RBP28.27■■■□□ 2.12
LCN2-207ENST00000494317 FAM198AQ9UFP1 575 aa28.27■■■□□ 2.12
LCN2-207ENST00000494317 GAKO14976 1311 aa28.26■■■□□ 2.11
LCN2-207ENST00000494317 ERO1BQ86YB8 467 aa28.26■■■□□ 2.11
LCN2-207ENST00000494317 FTSJ3Q8IY81 847 aaKnown RBP28.25■■■□□ 2.11
LCN2-207ENST00000494317 GORABQ5T7V8 394 aa28.24■■■□□ 2.11
LCN2-207ENST00000494317 SPTY2D1Q68D10 685 aaPredicted RBP28.24■■■□□ 2.11
LCN2-207ENST00000494317 ZFPM1Q8IX07 1006 aa28.24■■■□□ 2.11
LCN2-207ENST00000494317 ZBED9Q6R2W3 1325 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 INPP5BP32019 993 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 C1orf115Q9H7X2 142 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 HMG20BQ9P0W2 317 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 TRIM17Q9Y577 477 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 MYH2Q9UKX2 1941 aa28.23■■■□□ 2.11
LCN2-207ENST00000494317 RLBP1P12271 317 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 PPIL2Q13356 520 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 POLA2Q14181 598 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 SLF2Q8IX21 1173 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 FAM43AQ8N2R8 423 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 ERO1AQ96HE7 468 aa28.22■■■□□ 2.11
LCN2-207ENST00000494317 IRF6O14896 467 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 RGS3P49796 1198 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 TAF1CQ15572 869 aaPredicted RBP28.21■■■□□ 2.11
LCN2-207ENST00000494317 PI16Q6UXB8 463 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 ERICH6Q7L0X2 663 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 OTOP1Q7RTM1 612 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 ITPRIPQ8IWB1 547 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 SPATA5Q8NB90 893 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 CD99L2Q8TCZ2 262 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 FAM163AQ96GL9 167 aaPredicted RBP28.21■■■□□ 2.11
LCN2-207ENST00000494317 IDI2Q9BXS1 227 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 ZNF112Q9UJU3 913 aa28.21■■■□□ 2.11
LCN2-207ENST00000494317 CETPP11597 493 aa28.2■■■□□ 2.1
LCN2-207ENST00000494317 ATP8B2P98198 1209 aa28.2■■■□□ 2.1
LCN2-207ENST00000494317 SNAPC2Q13487 334 aa28.2■■■□□ 2.1
LCN2-207ENST00000494317 SSH3Q8TE77 659 aa28.2■■■□□ 2.1
LCN2-207ENST00000494317 RFX7Q2KHR2 1363 aa28.2■■■□□ 2.1
LCN2-207ENST00000494317 MROH7-TTC4A0A0A0MT08 1334 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 ENTPD3O75355 529 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 ARID4AP29374 1257 aaPredicted RBP28.19■■■□□ 2.1
LCN2-207ENST00000494317 BTDP43251 543 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 SP3Q02447 781 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 MECOMQ03112 1051 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 PPATQ06203 517 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 ZNF384Q8TF68 577 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 ZFYVE28Q9HCC9 887 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 AK9Q5TCS8 1911 aa28.19■■■□□ 2.1
LCN2-207ENST00000494317 TBC1D9Q6ZT07 1266 aa28.18■■■□□ 2.1
LCN2-207ENST00000494317 ATRNL1Q5VV63 1379 aa28.17■■■□□ 2.1
LCN2-207ENST00000494317 ZBTB7BO15156 539 aaPredicted RBP28.17■■■□□ 2.1
LCN2-207ENST00000494317 WDHD1O75717 1129 aaPredicted RBP28.17■■■□□ 2.1
LCN2-207ENST00000494317 OS9Q13438 667 aaPredicted RBP28.17■■■□□ 2.1
LCN2-207ENST00000494317 BTBD19C9JJ37 291 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 SURF6O75683 361 aaKnown RBP28.16■■■□□ 2.1
LCN2-207ENST00000494317 UQCRFS1P1P0C7P4 283 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 MCAMP43121 646 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 TNNI3KQ59H18 835 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 SH3BP5LQ7L8J4 393 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 GPR108Q9NPR9 543 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 DDX4Q9NQI0 724 aaKnown RBP28.16■■■□□ 2.1
LCN2-207ENST00000494317 FPGT-TNNI3KV9GXZ4 949 aa28.16■■■□□ 2.1
LCN2-207ENST00000494317 GPR75-ASB3A0A0A6YYF3 556 aa28.15■■■□□ 2.1
LCN2-207ENST00000494317 CAP1Q01518 475 aa28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms