RNA–Protein interactions for RNA: ENST00000493758.5

ITGB1-216, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 366 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-216ENST00000493758 PAGE1O75459 146 aa7.62□□□□□ -1.19
ITGB1-216ENST00000493758 CTSHP09668 335 aa7.62□□□□□ -1.19
ITGB1-216ENST00000493758 RPS26P62854 115 aaKnown RBP7.62□□□□□ -1.19
ITGB1-216ENST00000493758 MRPL58Q14197 206 aaKnown RBP7.62□□□□□ -1.19
ITGB1-216ENST00000493758 ZNF326Q5BKZ1 582 aaKnown RBP7.62□□□□□ -1.19
ITGB1-216ENST00000493758 EZH1Q92800 747 aaPredicted RBP7.62□□□□□ -1.19
ITGB1-216ENST00000493758 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
ITGB1-216ENST00000493758 RAXQ9Y2V3 346 aa7.62□□□□□ -1.19
ITGB1-216ENST00000493758 SART1O43290 800 aaKnown RBP7.61□□□□□ -1.19
ITGB1-216ENST00000493758 GAS2O43903 313 aaKnown RBP7.61□□□□□ -1.19
ITGB1-216ENST00000493758 TRIM37O94972 964 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 CELA3AP09093 270 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 BMP6P22004 513 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 ZNF157P51786 506 aaPredicted RBP7.61□□□□□ -1.19
ITGB1-216ENST00000493758 TAGLNQ01995 201 aaKnown RBP7.61□□□□□ -1.19
ITGB1-216ENST00000493758 PDE3AQ14432 1141 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 GIPC2Q8TF65 315 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 CYP8B1Q9UNU6 501 aa7.61□□□□□ -1.19
ITGB1-216ENST00000493758 USP31Q70CQ4 1352 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-216ENST00000493758 RBM47A0AV96 593 aaKnown RBP7.6□□□□□ -1.19
ITGB1-216ENST00000493758 ZNF862O60290 1169 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 FBXO24O75426 580 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 RLBP1P12271 317 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 LRRC14Q15048 493 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 PCNX4Q63HM2 1172 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 CLEC10AQ8IUN9 316 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
ITGB1-216ENST00000493758 FAM83CQ9BQN1 747 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 BCL11AQ9H165 835 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 SEMA6BQ9H3T3 888 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 CRIM1Q9NZV1 1036 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 ACTL7BQ9Y614 415 aa7.6□□□□□ -1.19
ITGB1-216ENST00000493758 TMPRSS2O15393 492 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 BMP3P12645 472 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 ZNF16P17020 682 aaPredicted RBP7.59□□□□□ -1.19
ITGB1-216ENST00000493758 TAF1CQ15572 869 aaPredicted RBP7.59□□□□□ -1.19
ITGB1-216ENST00000493758 PRSS36Q5K4E3 855 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 LLGL2Q6P1M3 1020 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 FAM161BQ96MY7 647 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 C7orf69Q9H7B7 122 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 MRS2Q9HD23 443 aa7.59□□□□□ -1.19
ITGB1-216ENST00000493758 FSTP19883 344 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 MAP4P27816 1152 aaKnown RBP7.58□□□□□ -1.2
ITGB1-216ENST00000493758 ID3Q02535 119 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
ITGB1-216ENST00000493758 MEI1Q5TIA1 1274 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 RASIP1Q5U651 963 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 GAL3ST3Q96A11 431 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 YIPF2Q9BWQ6 316 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 ATXN3LQ9H3M9 355 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 ACSS3Q9H6R3 686 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 STOML1Q9UBI4 398 aa7.58□□□□□ -1.2
ITGB1-216ENST00000493758 SLFN14P0C7P3 912 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 DRD2P14416 443 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 ERVK-24P63145 666 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 CPSF6Q16630 551 aaKnown RBP eCLIP7.57□□□□□ -1.2
ITGB1-216ENST00000493758 SGO2Q562F6 1265 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 ZC3H12AQ5D1E8 599 aaKnown RBP7.57□□□□□ -1.2
ITGB1-216ENST00000493758 RNF43Q68DV7 783 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 BEND4Q6ZU67 534 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 WDR89Q96FK6 387 aaPredicted RBP7.57□□□□□ -1.2
ITGB1-216ENST00000493758 RAD18Q9NS91 495 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 FAM105AQ9NUU6 356 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 VTI1BQ9UEU0 232 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 PPP1R9AQ9ULJ8 1098 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 AP4E1Q9UPM8 1137 aa7.57□□□□□ -1.2
ITGB1-216ENST00000493758 VAMP1P23763 118 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 NFIAQ12857 509 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 AKAP4Q5JQC9 854 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 MAP1SQ66K74 1059 aaPredicted RBP7.56□□□□□ -1.2
ITGB1-216ENST00000493758 TTBK2Q6IQ55 1244 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 AGMOQ6ZNB7 445 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 GPBAR1Q8TDU6 330 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 KCNB2Q92953 911 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 DBNDD2Q9BQY9 259 aa7.56□□□□□ -1.2
ITGB1-216ENST00000493758 IGLV1-40P01703 118 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 LIG1P18858 919 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 LIG3P49916 1009 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 RING1Q06587 406 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 CDPF1Q6NVV7 123 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 TRIM42Q8IWZ5 723 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 GRIN3AQ8TCU5 1115 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 FANCD2OSQ96PS1 177 aa7.55□□□□□ -1.2
ITGB1-216ENST00000493758 MAP7Q14244 749 aa7.54□□□□□ -1.2
ITGB1-216ENST00000493758 SEMA6CQ9H3T2 930 aa7.54□□□□□ -1.2
ITGB1-216ENST00000493758 CBX8Q9HC52 389 aa7.54□□□□□ -1.2
ITGB1-216ENST00000493758 FAM95CA0A1B0GW59 222 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 HMX2A2RU54 273 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 USP11P51784 963 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 PAOXQ6QHF9 649 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 SEZ6L2Q6UXD5 910 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 DYMQ7RTS9 669 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 CCDC84Q86UT8 332 aaPredicted RBP7.53□□□□□ -1.2
ITGB1-216ENST00000493758 RGS22Q8NE09 1264 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 ZC3H12CQ9C0D7 883 aaKnown RBP7.53□□□□□ -1.2
ITGB1-216ENST00000493758 KCNF1Q9H3M0 494 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 DISC1Q9NRI5 854 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 RNF112Q9ULX5 631 aa7.53□□□□□ -1.2
ITGB1-216ENST00000493758 TACC3Q9Y6A5 838 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms