RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ADGRE2Q9UHX3 823 aa6.3□□□□□ -1.4
PTCD3-218ENST00000493430 IGHA2P01877 340 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 LCE3BQ5TA77 95 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 VSIG10LQ86VR7 867 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 RETREG2Q8NC44 543 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 FBXL18Q96ME1 805 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 CSRNP1Q96S65 589 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 PPP4R2Q9NY27 417 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 RNF114Q9Y508 228 aa6.29□□□□□ -1.4
PTCD3-218ENST00000493430 TP53INP2Q8IXH6 220 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 ABI1Q8IZP0 508 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 ALKBH8Q96BT7 664 aaKnown RBP6.28□□□□□ -1.4
PTCD3-218ENST00000493430 WDR18Q9BV38 432 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 RBCK1Q9BYM8 510 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 DAGLAQ9Y4D2 1042 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 ABCC9O60706 1549 aa6.28□□□□□ -1.4
PTCD3-218ENST00000493430 SLFN14P0C7P3 912 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 HNRNPUQ00839 825 aaKnown RBP eCLIP6.27□□□□□ -1.41
PTCD3-218ENST00000493430 GRM2Q14416 872 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 SEZ6L2Q6UXD5 910 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 ERICH6Q7L0X2 663 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 ZNF765Q7L2R6 523 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 GLIS3Q8NEA6 775 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 EPS8L3Q8TE67 593 aaKnown RBP6.27□□□□□ -1.41
PTCD3-218ENST00000493430 LRRC4CQ9HCJ2 640 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 C1GALT1Q9NS00 363 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 PPP1R9AQ9ULJ8 1098 aa6.27□□□□□ -1.41
PTCD3-218ENST00000493430 LIG1P18858 919 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 ZNF157P51786 506 aaPredicted RBP6.26□□□□□ -1.41
PTCD3-218ENST00000493430 PPP2R3AQ06190 1150 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 FAAP100Q0VG06 881 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 OGFOD3Q6PK18 319 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 DTHD1Q6ZMT9 781 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 KRTAP19-1Q8IUB9 90 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 CCDC86Q9H6F5 360 aaKnown RBP6.26□□□□□ -1.41
PTCD3-218ENST00000493430 LGR6Q9HBX8 967 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 NLRP2Q9NX02 1062 aa6.26□□□□□ -1.41
PTCD3-218ENST00000493430 SOWAHDA6NJG2 315 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 DYNC1LI2O43237 492 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-218ENST00000493430 FCGRTP55899 365 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 CYP27C1Q4G0S4 372 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 WDR89Q96FK6 387 aaPredicted RBP6.25□□□□□ -1.41
PTCD3-218ENST00000493430 ZC3H12CQ9C0D7 883 aaKnown RBP6.25□□□□□ -1.41
PTCD3-218ENST00000493430 ATXN3LQ9H3M9 355 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 PIDD1Q9HB75 910 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 TMEM39AQ9NV64 488 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 CRIM1Q9NZV1 1036 aa6.25□□□□□ -1.41
PTCD3-218ENST00000493430 ZC3H7BQ9UGR2 993 aaKnown RBP6.25□□□□□ -1.41
PTCD3-218ENST00000493430 TMPRSS2O15393 492 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 GSTP1P09211 210 aaKnown RBP6.24□□□□□ -1.41
PTCD3-218ENST00000493430 XRCC5P13010 732 aaKnown RBP6.24□□□□□ -1.41
PTCD3-218ENST00000493430 ID3Q02535 119 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 NFXL1Q6ZNB6 911 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 AGBL5Q8NDL9 886 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 FLCNQ8NFG4 579 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 KRT82Q9NSB4 513 aa6.24□□□□□ -1.41
PTCD3-218ENST00000493430 BIN2Q9UBW5 565 aaPredicted RBP6.24□□□□□ -1.41
PTCD3-218ENST00000493430 SUPT5HO00267 1087 aaKnown RBP6.23□□□□□ -1.41
PTCD3-218ENST00000493430 ZNF862O60290 1169 aa6.23□□□□□ -1.41
PTCD3-218ENST00000493430 CBLL1Q75N03 491 aa6.23□□□□□ -1.41
PTCD3-218ENST00000493430 TMC7Q7Z402 723 aa6.23□□□□□ -1.41
PTCD3-218ENST00000493430 FANCD2OSQ96PS1 177 aa6.23□□□□□ -1.41
PTCD3-218ENST00000493430 BCO2Q9BYV7 579 aa6.23□□□□□ -1.41
PTCD3-218ENST00000493430 GPN3Q9UHW5 284 aaPredicted RBP6.23□□□□□ -1.41
PTCD3-218ENST00000493430 YBX3P16989 372 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTCD3-218ENST00000493430 PLCB3Q01970 1234 aa6.22□□□□□ -1.41
PTCD3-218ENST00000493430 KIF4BQ2VIQ3 1234 aa6.22□□□□□ -1.41
PTCD3-218ENST00000493430 SMYD4Q8IYR2 804 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-218ENST00000493430 KCNB2Q92953 911 aa6.22□□□□□ -1.41
PTCD3-218ENST00000493430 PAK6Q9NQU5 681 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-218ENST00000493430 DISC1Q9NRI5 854 aa6.22□□□□□ -1.41
PTCD3-218ENST00000493430 DCTN4Q9UJW0 460 aa6.22□□□□□ -1.41
PTCD3-218ENST00000493430 GNEQ9Y223 722 aaKnown RBP6.22□□□□□ -1.41
PTCD3-218ENST00000493430 PI16Q6UXB8 463 aa6.21□□□□□ -1.42
PTCD3-218ENST00000493430 STK11IPQ8N1F8 1099 aa6.21□□□□□ -1.42
PTCD3-218ENST00000493430 SLC5A6Q9Y289 635 aa6.21□□□□□ -1.42
PTCD3-218ENST00000493430 AKAP2Q9Y2D5 859 aa6.21□□□□□ -1.42
PTCD3-218ENST00000493430 BTBD11A6QL63 1104 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 RNGTTO60942 597 aaKnown RBP6.2□□□□□ -1.42
PTCD3-218ENST00000493430 FAM87AP0C7U9 286 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 ARNTP27540 789 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 CDK5R2Q13319 367 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 DSC3Q14574 896 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.2□□□□□ -1.42
PTCD3-218ENST00000493430 PDZD3Q86UT5 571 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 BCL7CQ8WUZ0 217 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-218ENST00000493430 ASIC4Q96FT7 647 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 EMILIN2Q9BXX0 1053 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 PCOLCE2Q9UKZ9 415 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 PCDHGC5Q9Y5F6 944 aa6.2□□□□□ -1.42
PTCD3-218ENST00000493430 BRD1O95696 1058 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 HCLS1P14317 486 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-218ENST00000493430 JUNBP17275 347 aaPredicted RBP6.19□□□□□ -1.42
PTCD3-218ENST00000493430 MAPK1P28482 360 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 COL19A1Q14993 1142 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 NXPE4Q6UWF7 544 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 SULF2Q8IWU5 870 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 MISP3Q96FF7 219 aa6.19□□□□□ -1.42
PTCD3-218ENST00000493430 PNMA6FA0A0J9YX94 578 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms