RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 SPATA24Q86W54 205 aa18.33■□□□□ 0.53
BRAT1-206ENST00000493232 RXRAP19793 462 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 MXRA7P84157 204 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 MCM6Q14566 821 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 DPH6Q7L8W6 267 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 TICAM2Q86XR7 235 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 EDC4Q6P2E9 1401 aaKnown RBP18.33■□□□□ 0.52
BRAT1-206ENST00000493232 VAV2P52735 878 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 WDR44Q5JSH3 913 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 ARFGAP2Q8N6H7 521 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 ANKS4BQ8N8V4 417 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 WDR66Q8TBY9 1149 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 GGA1Q9UJY5 639 aa18.33■□□□□ 0.52
BRAT1-206ENST00000493232 CCNL1Q9UK58 526 aaPredicted RBP18.33■□□□□ 0.52
BRAT1-206ENST00000493232 TCOF1Q13428 1488 aaKnown RBP18.32■□□□□ 0.52
BRAT1-206ENST00000493232 NDC80O14777 642 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 PRIM1P49642 420 aaKnown RBP18.32■□□□□ 0.52
BRAT1-206ENST00000493232 KIFAP3Q92845 792 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 FAM89AQ96GI7 184 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 SMTNP53814 917 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 TXNDC16Q9P2K2 825 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 EIF4G3O43432 1585 aaKnown RBP18.32■□□□□ 0.52
BRAT1-206ENST00000493232 ADAMTS12P58397 1594 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 ZMYM3Q14202 1370 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 CCT6AP40227 531 aaKnown RBP18.32■□□□□ 0.52
BRAT1-206ENST00000493232 PPP2R5BQ15173 497 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 CNNM4Q6P4Q7 775 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 HOOK2Q96ED9 719 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 ZNF174Q15697 407 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 PICK1Q9NRD5 415 aa18.32■□□□□ 0.52
BRAT1-206ENST00000493232 ZBTB7BO15156 539 aaPredicted RBP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 FNBP1Q96RU3 617 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 STK32BQ9NY57 414 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 TMOD4Q9NZQ9 345 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 TNNQ9UQP3 1299 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 TRAF5O00463 557 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 CALCOCO2Q13137 446 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 DCAF17Q5H9S7 520 aaPredicted RBP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 ZNF569Q5MCW4 686 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 CCDC63Q8NA47 563 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 ATRIPQ8WXE1 791 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 SMC6Q96SB8 1091 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 ZKSCAN3Q9BRR0 538 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 SEL1L2Q5TEA6 688 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 B4E1Z4 1266 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 CLCN1P35523 988 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 SAP30BPQ9UHR5 308 aaKnown RBP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 ANGEL1Q9UNK9 670 aaKnown RBP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 MAPKBP1O60336 1514 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 NCKAP5LQ9HCH0 1330 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 AKR1B15C9JRZ8 316 aaPredicted RBP18.31■□□□□ 0.52
BRAT1-206ENST00000493232 RAPGEF1Q13905 1077 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 XAGE2Q96GT9 111 aa18.31■□□□□ 0.52
BRAT1-206ENST00000493232 XRCC6P12956 609 aaKnown RBP eCLIP18.3■□□□□ 0.52
BRAT1-206ENST00000493232 GRM1Q13255 1194 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 TAF12Q16514 161 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 PLIN2Q99541 437 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 GPCPD1Q9NPB8 672 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 EXOC7Q9UPT5 735 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 UHRF1BP1Q6BDS2 1440 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 PPP1R7Q15435 360 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 CCDC117Q8IWD4 279 aaPredicted RBP18.3■□□□□ 0.52
BRAT1-206ENST00000493232 NAP1L3Q99457 506 aaPredicted RBP18.3■□□□□ 0.52
BRAT1-206ENST00000493232 CSRNP2Q9H175 543 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 JAG2Q9Y219 1238 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 SLC27A2O14975 620 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 CCDC6Q16204 474 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 LZTFL1Q9NQ48 299 aa18.3■□□□□ 0.52
BRAT1-206ENST00000493232 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 BRDTQ58F21 947 aaPredicted RBP18.29■□□□□ 0.52
BRAT1-206ENST00000493232 NOC4LQ9BVI4 516 aaKnown RBP18.29■□□□□ 0.52
BRAT1-206ENST00000493232 STX10O60499 249 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 ZBTB16Q05516 673 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 BIRC3Q13489 604 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 KARSQ15046 597 aaKnown RBP18.29■□□□□ 0.52
BRAT1-206ENST00000493232 ANO1Q5XXA6 986 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 CEP128Q6ZU80 1094 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 CAPZA3Q96KX2 299 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 ARMT1Q9H993 441 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 FAM169AQ9Y6X4 670 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 NPC1L1Q9UHC9 1359 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 SLC8A3P57103 927 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 TIMM10P62072 90 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 SP4Q02446 784 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 PDE4DQ08499 809 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 LZTS2Q9BRK4 669 aa18.29■□□□□ 0.52
BRAT1-206ENST00000493232 CALUO43852 315 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-206ENST00000493232 LPIN2Q92539 896 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 IFT74Q96LB3 600 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 BAG1Q99933 345 aaPredicted RBP18.28■□□□□ 0.52
BRAT1-206ENST00000493232 SELENOSQ9BQE4 189 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 MAK16Q9BXY0 300 aaKnown RBP18.28■□□□□ 0.52
BRAT1-206ENST00000493232 ATP2C2O75185 946 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 AKNAD1Q5T1N1 836 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 DBNDD2Q9BQY9 259 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 ALDH3A1P30838 453 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 CCDC122Q5T0U0 273 aa18.28■□□□□ 0.52
BRAT1-206ENST00000493232 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms