RNA–Protein interactions for RNA: ENST00000492979.2

SSC4D-202, Transcript of scavenger receptor cysteine rich family member with 4 domains, humanhuman

TSL 5

Gene SSC4D, Length 1,224 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4D-202ENST00000492979 HMG20BQ9P0W2 317 aa23.26■■□□□ 1.31
SSC4D-202ENST00000492979 MANSC4A6NHS7 340 aaPredicted RBP23.25■■□□□ 1.31
SSC4D-202ENST00000492979 SURF6O75683 361 aaKnown RBP23.25■■□□□ 1.31
SSC4D-202ENST00000492979 TNNI3KQ59H18 835 aa23.25■■□□□ 1.31
SSC4D-202ENST00000492979 CDC42EP5Q6NZY7 148 aa23.25■■□□□ 1.31
SSC4D-202ENST00000492979 IDI2Q9BXS1 227 aa23.25■■□□□ 1.31
SSC4D-202ENST00000492979 FPGT-TNNI3KV9GXZ4 949 aa23.25■■□□□ 1.31
SSC4D-202ENST00000492979 TESPA1A2RU30 521 aaPredicted RBP23.24■■□□□ 1.31
SSC4D-202ENST00000492979 NPM3O75607 178 aaKnown RBP23.24■■□□□ 1.31
SSC4D-202ENST00000492979 PRKG1Q13976 671 aa23.24■■□□□ 1.31
SSC4D-202ENST00000492979 DIXDC1Q155Q3 683 aa23.24■■□□□ 1.31
SSC4D-202ENST00000492979 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.24■■□□□ 1.31
SSC4D-202ENST00000492979 TRPA1O75762 1119 aa23.23■■□□□ 1.31
SSC4D-202ENST00000492979 ALDH1A1P00352 501 aa23.23■■□□□ 1.31
SSC4D-202ENST00000492979 HSP90AB4PQ58FF6 505 aa23.23■■□□□ 1.31
SSC4D-202ENST00000492979 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.23■■□□□ 1.31
SSC4D-202ENST00000492979 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
SSC4D-202ENST00000492979 WNK4Q96J92 1243 aa23.23■■□□□ 1.31
SSC4D-202ENST00000492979 MAP3K9P80192 1104 aa23.22■■□□□ 1.31
SSC4D-202ENST00000492979 GORABQ5T7V8 394 aa23.22■■□□□ 1.31
SSC4D-202ENST00000492979 ERC1Q8IUD2 1116 aa23.22■■□□□ 1.31
SSC4D-202ENST00000492979 CLMNQ96JQ2 1002 aa23.22■■□□□ 1.31
SSC4D-202ENST00000492979 C1orf115Q9H7X2 142 aa23.22■■□□□ 1.31
SSC4D-202ENST00000492979 GPR75-ASB3A0A0A6YYF3 556 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 ENTPD3O75355 529 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 CCDC158Q5M9N0 1113 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 ERICH6Q7L0X2 663 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 CDAN1Q8IWY9 1227 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 FZD1Q9UP38 647 aa23.21■■□□□ 1.31
SSC4D-202ENST00000492979 RFX7Q2KHR2 1363 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 LDHCP07864 332 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 MCAMP43121 646 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 CACNB3P54284 484 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 MAP3K10Q02779 954 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 DCAF15Q66K64 600 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 TMED8Q6PL24 325 aaPredicted RBP23.2■■□□□ 1.3
SSC4D-202ENST00000492979 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.2■■□□□ 1.3
SSC4D-202ENST00000492979 USP40Q9NVE5 1235 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 FAM198AQ9UFP1 575 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 ABCF2Q9UG63 623 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 TSKSQ9UJT2 592 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 ZNF112Q9UJU3 913 aa23.2■■□□□ 1.3
SSC4D-202ENST00000492979 GSTO1P78417 241 aa23.19■■□□□ 1.3
SSC4D-202ENST00000492979 DZIP1Q86YF9 867 aaKnown RBP23.19■■□□□ 1.3
SSC4D-202ENST00000492979 ZNF384Q8TF68 577 aa23.19■■□□□ 1.3
SSC4D-202ENST00000492979 NSUN4Q96CB9 384 aaKnown RBP23.19■■□□□ 1.3
SSC4D-202ENST00000492979 CASP8AP2Q9UKL3 1982 aa23.18■■□□□ 1.3
SSC4D-202ENST00000492979 MYH2Q9UKX2 1941 aa23.18■■□□□ 1.3
SSC4D-202ENST00000492979 MROH7-TTC4A0A0A0MT08 1334 aa23.18■■□□□ 1.3
SSC4D-202ENST00000492979 MECOMQ03112 1051 aa23.18■■□□□ 1.3
SSC4D-202ENST00000492979 OS9Q13438 667 aaPredicted RBP23.18■■□□□ 1.3
SSC4D-202ENST00000492979 DBNDD2Q9BQY9 259 aa23.18■■□□□ 1.3
SSC4D-202ENST00000492979 GJA5P36382 358 aa23.17■■□□□ 1.3
SSC4D-202ENST00000492979 NFIAQ12857 509 aa23.17■■□□□ 1.3
SSC4D-202ENST00000492979 IFNL1Q8IU54 200 aa23.17■■□□□ 1.3
SSC4D-202ENST00000492979 EAF2Q96CJ1 260 aaPredicted RBP23.17■■□□□ 1.3
SSC4D-202ENST00000492979 MS4A4AQ96JQ5 239 aa23.17■■□□□ 1.3
SSC4D-202ENST00000492979 DBNLQ9UJU6 430 aaKnown RBP23.17■■□□□ 1.3
SSC4D-202ENST00000492979 COG6Q9Y2V7 657 aa23.17■■□□□ 1.3
SSC4D-202ENST00000492979 SPDYE5A6NIY4 337 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 HMMRO75330 724 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 RHBDL3P58872 404 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 VGLL4Q14135 290 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 ZNF341Q9BYN7 854 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 CSADQ9Y600 493 aa23.16■■□□□ 1.3
SSC4D-202ENST00000492979 WDHD1O75717 1129 aaPredicted RBP23.15■■□□□ 1.3
SSC4D-202ENST00000492979 OTUD7BQ6GQQ9 843 aa23.15■■□□□ 1.3
SSC4D-202ENST00000492979 ERO1BQ86YB8 467 aa23.15■■□□□ 1.3
SSC4D-202ENST00000492979 SIRT2Q8IXJ6 389 aa23.15■■□□□ 1.3
SSC4D-202ENST00000492979 ATRNL1Q5VV63 1379 aa23.14■■□□□ 1.3
SSC4D-202ENST00000492979 PPP4CP60510 307 aa23.14■■□□□ 1.29
SSC4D-202ENST00000492979 TTC39AQ5SRH9 613 aa23.14■■□□□ 1.29
SSC4D-202ENST00000492979 PI16Q6UXB8 463 aa23.14■■□□□ 1.29
SSC4D-202ENST00000492979 OPTNQ96CV9 577 aa23.14■■□□□ 1.29
SSC4D-202ENST00000492979 ZCCHC17Q9NP64 241 aaKnown RBP23.14■■□□□ 1.29
SSC4D-202ENST00000492979 OTOFQ9HC10 1997 aa23.14■■□□□ 1.29
SSC4D-202ENST00000492979 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
SSC4D-202ENST00000492979 RAB11FIP3O75154 756 aa23.13■■□□□ 1.29
SSC4D-202ENST00000492979 BTDP43251 543 aa23.13■■□□□ 1.29
SSC4D-202ENST00000492979 GTF2A2P52657 109 aa23.13■■□□□ 1.29
SSC4D-202ENST00000492979 NOL9Q5SY16 702 aaKnown RBP23.13■■□□□ 1.29
SSC4D-202ENST00000492979 ABHD8Q96I13 439 aa23.13■■□□□ 1.29
SSC4D-202ENST00000492979 SNCAIPQ9Y6H5 919 aa23.13■■□□□ 1.29
SSC4D-202ENST00000492979 GPR25O00155 361 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 TBC1D12O60347 775 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 CYP2E1P05181 493 aaPredicted RBP23.12■■□□□ 1.29
SSC4D-202ENST00000492979 RGS3P49796 1198 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 PPATQ06203 517 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 RHPN1Q8TCX5 695 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 KIF1BPQ96EK5 621 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 WRNIP1Q96S55 665 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 ELP3Q9H9T3 547 aa23.12■■□□□ 1.29
SSC4D-202ENST00000492979 IGF2BP3O00425 579 aaKnown RBP eCLIP23.11■■□□□ 1.29
SSC4D-202ENST00000492979 MKRN3Q13064 507 aaKnown RBP23.11■■□□□ 1.29
SSC4D-202ENST00000492979 PKN2Q16513 984 aaKnown RBP23.11■■□□□ 1.29
SSC4D-202ENST00000492979 PTPN18Q99952 460 aa23.11■■□□□ 1.29
SSC4D-202ENST00000492979 MCOLN1Q9GZU1 580 aa23.11■■□□□ 1.29
SSC4D-202ENST00000492979 LRP2BPQ9P2M1 347 aa23.11■■□□□ 1.29
SSC4D-202ENST00000492979 EXOC6BQ9Y2D4 811 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms