RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 C2orf69Q8N8R5 385 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 OTUD7AQ8TE49 926 aaPredicted RBP16.98■□□□□ 0.31
CCM2-217ENST00000492883 ZNF384Q8TF68 577 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 PAG1Q9NWQ8 432 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 PPP2R3BQ9Y5P8 575 aa16.98■□□□□ 0.31
CCM2-217ENST00000492883 TTC41PQ6P2S7 1318 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 GPR75-ASB3A0A0A6YYF3 556 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 BAG3O95817 575 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 MX1P20591 662 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 CYP7A1P22680 504 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 CHD1LQ86WJ1 897 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 MAGEB6Q8N7X4 407 aa16.97■□□□□ 0.31
CCM2-217ENST00000492883 EDC3Q96F86 508 aaKnown RBP16.97■□□□□ 0.31
CCM2-217ENST00000492883 NUCB1Q02818 461 aa16.96■□□□□ 0.31
CCM2-217ENST00000492883 SUPT20HL1Q3ZLR7 823 aa16.96■□□□□ 0.31
CCM2-217ENST00000492883 GBA2Q9HCG7 927 aaPredicted RBP16.96■□□□□ 0.31
CCM2-217ENST00000492883 GLRX3O76003 335 aaKnown RBP16.95■□□□□ 0.3
CCM2-217ENST00000492883 TCP10Q12799 353 aa16.95■□□□□ 0.3
CCM2-217ENST00000492883 TTLL12Q14166 644 aaPredicted RBP16.95■□□□□ 0.3
CCM2-217ENST00000492883 SLC9C2Q5TAH2 1124 aa16.95■□□□□ 0.3
CCM2-217ENST00000492883 FKBP1CQ5VVH2 108 aa16.95■□□□□ 0.3
CCM2-217ENST00000492883 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.95■□□□□ 0.3
CCM2-217ENST00000492883 PRKG1Q13976 671 aa16.94■□□□□ 0.3
CCM2-217ENST00000492883 NBPF12Q5TAG4 269 aaPredicted RBP16.94■□□□□ 0.3
CCM2-217ENST00000492883 TMED8Q6PL24 325 aaPredicted RBP16.94■□□□□ 0.3
CCM2-217ENST00000492883 FAM83AQ86UY5 434 aa16.94■□□□□ 0.3
CCM2-217ENST00000492883 TMEM39BQ9GZU3 492 aa16.94■□□□□ 0.3
CCM2-217ENST00000492883 AATFQ9NY61 560 aaKnown RBP eCLIP16.94■□□□□ 0.3
CCM2-217ENST00000492883 TLL2Q9Y6L7 1015 aa16.94■□□□□ 0.3
CCM2-217ENST00000492883 MAP4K4O95819 1239 aaPredicted RBP16.93■□□□□ 0.3
CCM2-217ENST00000492883 PLCG2P16885 1265 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 PDE1AP54750 535 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 NFIAQ12857 509 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 DEFB115Q30KQ5 88 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 PAXIP1Q6ZW49 1069 aaPredicted RBP16.93■□□□□ 0.3
CCM2-217ENST00000492883 ADGRA1Q86SQ6 560 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 PI4K2BQ8TCG2 481 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 FAM151AQ8WW52 585 aa16.93■□□□□ 0.3
CCM2-217ENST00000492883 MKRN1Q9UHC7 482 aaKnown RBP16.93■□□□□ 0.3
CCM2-217ENST00000492883 PPP1R12BO60237 982 aaPredicted RBP16.92■□□□□ 0.3
CCM2-217ENST00000492883 PDE6AP16499 860 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 HUNKP57058 714 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 RHBDL3P58872 404 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 PPP4CP60510 307 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 FKBP1BP68106 108 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 PICALMQ13492 652 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 ZSCAN25Q6NSZ9 544 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 ARMC9Q7Z3E5 817 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 SAPCD2Q86UD0 394 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 MIGA1Q8NAN2 632 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 STAP2Q9UGK3 403 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 SALL3Q9BXA9 1300 aa16.92■□□□□ 0.3
CCM2-217ENST00000492883 CNTNAP1P78357 1384 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 ENTPD3O75355 529 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 WDHD1O75717 1129 aaPredicted RBP16.91■□□□□ 0.3
CCM2-217ENST00000492883 RGS3P49796 1198 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 MOB2Q70IA6 237 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 TEX11Q8IYF3 940 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 SH3RF3Q8TEJ3 882 aaPredicted RBP16.91■□□□□ 0.3
CCM2-217ENST00000492883 TEPSINQ96N21 525 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 ZNF532Q9HCE3 1301 aa16.91■□□□□ 0.3
CCM2-217ENST00000492883 RASSF10A6NK89 507 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 ADD2P35612 726 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 DYNLL1P63167 89 aaKnown RBP16.9■□□□□ 0.3
CCM2-217ENST00000492883 CERS3Q8IU89 383 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 ZSCAN29Q8IWY8 852 aaPredicted RBP16.9■□□□□ 0.3
CCM2-217ENST00000492883 CDAN1Q8IWY9 1227 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 ZFPM1Q8IX07 1006 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 DNAJC5GQ8N7S2 189 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 KBTBD3Q8NAB2 608 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 HOOK2Q96ED9 719 aa16.9■□□□□ 0.3
CCM2-217ENST00000492883 ANGEL1Q9UNK9 670 aaKnown RBP16.9■□□□□ 0.3
CCM2-217ENST00000492883 MAGEB6P1A0A0J9YX57 407 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 GRM1Q13255 1194 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 PLEKHM2Q8IWE5 1019 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 TGFBRAP1Q8WUH2 860 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 KLRG1Q96E93 195 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 FZD1Q9UP38 647 aa16.89■□□□□ 0.29
CCM2-217ENST00000492883 MYH13Q9UKX3 1938 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 TCRBV5S4A2TA0A5A2 114 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
CCM2-217ENST00000492883 UBE3CQ15386 1083 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 LRRFIP1Q32MZ4 808 aaKnown RBP16.88■□□□□ 0.29
CCM2-217ENST00000492883 SLFNL1Q499Z3 407 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 HHIPL1Q96JK4 782 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 CCDC136Q96JN2 1154 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 FSD1Q9BTV5 496 aa16.88■□□□□ 0.29
CCM2-217ENST00000492883 DDX4Q9NQI0 724 aaKnown RBP16.88■□□□□ 0.29
CCM2-217ENST00000492883 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.88■□□□□ 0.29
CCM2-217ENST00000492883 USP2O75604 605 aaPredicted RBP16.87■□□□□ 0.29
CCM2-217ENST00000492883 ECE1P42892 770 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 USP5P45974 858 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 IREB2P48200 963 aaKnown RBP16.87■□□□□ 0.29
CCM2-217ENST00000492883 VEGFBP49765 207 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 ZNF157P51786 506 aaPredicted RBP16.87■□□□□ 0.29
CCM2-217ENST00000492883 CYP4F22Q6NT55 531 aa16.87■□□□□ 0.29
CCM2-217ENST00000492883 RGMBQ6NW40 437 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms