RNA–Protein interactions for RNA: ENST00000492816.6

FN1-224, Transcript of fibronectin 1, humanhuman

TSL 5

Gene FN1, Length 9,171 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-224ENST00000492816 METAP2P50579 478 aaKnown RBP eCLIP6.07□□□□□ -1.44
FN1-224ENST00000492816 ATXN3P54252 364 aaPredicted RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 RASA3Q14644 834 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 NBPF20Q3BBV1 942 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 DOLKQ9UPQ8 538 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 SLC4A7Q9Y6M7 1214 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 CASKIN1Q8WXD9 1431 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 RIMS2Q9UQ26 1411 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 EXOSC9Q06265 439 aaKnown RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 HS6ST3Q8IZP7 471 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 RYBPQ8N488 228 aaPredicted RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 RAB3IPQ96QF0 476 aaPredicted RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 NOB1Q9ULX3 412 aaKnown RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 TMCO5BA8MYB1 307 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 ZW10O43264 779 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 CCDC192P0DO97 292 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 HERC4Q5GLZ8 1057 aaPredicted RBP6.07□□□□□ -1.44
FN1-224ENST00000492816 JAKMIP2Q96AA8 810 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 ZFYVE28Q9HCC9 887 aa6.07□□□□□ -1.44
FN1-224ENST00000492816 CCDC85CA6NKD9 419 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 IL15P40933 162 aaPredicted RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 ZBTB16Q05516 673 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 ARHGAP29Q52LW3 1261 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 GPATCH4Q5T3I0 446 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 PGBD3Q8N328 593 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 MIS12Q9H081 205 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 RASAL2Q9UJF2 1139 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 C16orf72Q14CZ0 275 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 HAUS3Q68CZ6 603 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CIAPIN1Q6FI81 312 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 ASXL2Q76L83 1435 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 YEATS4O95619 227 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CC2D1AQ6P1N0 951 aaPredicted RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 APOBEC3FQ8IUX4 373 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 PALM2Q8IXS6 379 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 TMEM57Q8N5G2 664 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 NBPF15Q8N660 670 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 ZNF18P17022 549 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 GSTA5Q7RTV2 222 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CSRNP2Q9H175 543 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CCDC171Q6TFL3 1326 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 ZNF644Q9H582 1327 aaPredicted RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 ZNF518AQ6AHZ1 1483 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 ARHGEF35A5YM69 484 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CEP128Q6ZU80 1094 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 PDZD4Q76G19 769 aaPredicted RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 EVI5LQ96CN4 794 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 FAM204AQ9H8W3 233 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.06□□□□□ -1.44
FN1-224ENST00000492816 SH3TC1Q8TE82 1336 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 CAPN9O14815 690 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 RECQLP46063 649 aaPredicted RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 ARL4DP49703 201 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 KIAA0753Q2KHM9 967 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 C4orf50Q6ZRC1 276 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 NLRP7Q8WX94 980 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 NRBP2Q9NSY0 501 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 SRPRBQ9Y5M8 271 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 ZNF233A6NK53 670 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 STAT6P42226 847 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 PPFIA1Q13136 1202 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 PRPF4BQ13523 1007 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 MCMDC2Q4G0Z9 681 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 IPO11Q9UI26 975 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 CPSF3Q9UKF6 684 aaKnown RBP6.06□□□□□ -1.44
FN1-224ENST00000492816 AGTPBP1Q9UPW5 1226 aa6.06□□□□□ -1.44
FN1-224ENST00000492816 WDR46O15213 610 aaKnown RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 MCM5P33992 734 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 RTN1Q16799 776 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 CCDC63Q8NA47 563 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 FGD6Q6ZV73 1430 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 SLC1A4P43007 532 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 SPAG5Q96R06 1193 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 CUL7Q14999 1698 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 BCAR3O75815 825 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 PSMD2Q13200 908 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 PNMA8AQ86V59 439 aaPredicted RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 TNNQ9UQP3 1299 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 HMGXB3Q12766 1538 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 WDR64B1ANS9 1081 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 LIN9Q5TKA1 542 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 MRPL11Q9Y3B7 192 aaKnown RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 CFAP74Q9C0B2 1584 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 PPEF1O14829 653 aaPredicted RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 TAF3Q5VWG9 929 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 HAUS6Q7Z4H7 955 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 UPF3BQ9BZI7 483 aaKnown RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 PRIM1P49642 420 aaKnown RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 DEPTORQ8TB45 409 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 PLCD4Q9BRC7 762 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 PKD2L1Q9P0L9 805 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 ZHX1Q9UKY1 873 aaPredicted RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 DCDC2CA8MYV0 355 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 ALDH3A1P30838 453 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 CIITAP33076 1130 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 NASPP49321 788 aaPredicted RBP6.05□□□□□ -1.44
FN1-224ENST00000492816 MAP9Q49MG5 647 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 CCDC65Q8IXS2 484 aa6.05□□□□□ -1.44
FN1-224ENST00000492816 LMBR1Q8WVP7 490 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms