RNA–Protein interactions for RNA: ENST00000492511.1

PDLIM1-204, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 453 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-204ENST00000492511 NFIAQ12857 509 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 GRM1Q13255 1194 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 PRKG1Q13976 671 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 MAP3K11Q16584 847 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 FKBP1CQ5VVH2 108 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 SPTY2D1Q68D10 685 aaPredicted RBP8.82□□□□□ -1
PDLIM1-204ENST00000492511 PAXIP1Q6ZW49 1069 aaPredicted RBP8.82□□□□□ -1
PDLIM1-204ENST00000492511 ERICH6Q7L0X2 663 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 ZFPM1Q8IX07 1006 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 DCTPP1Q9H773 170 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 PIH1D3Q9NQM4 214 aaKnown RBP8.82□□□□□ -1
PDLIM1-204ENST00000492511 FAM198AQ9UFP1 575 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 NDUFB9Q9Y6M9 179 aa8.82□□□□□ -1
PDLIM1-204ENST00000492511 GPR75-ASB3A0A0A6YYF3 556 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 SLC10A3P09131 477 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 MAP2K2P36507 400 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 RHBDL3P58872 404 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 TNFAIP1Q13829 316 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 SUPT20HL1Q3ZLR7 823 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 FAM83AQ86UY5 434 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 DZIP1Q86YF9 867 aaKnown RBP8.81□□□□□ -1
PDLIM1-204ENST00000492511 RASAL3Q86YV0 1011 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 ABHD8Q96I13 439 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 ANTXR1Q9H6X2 564 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 USP40Q9NVE5 1235 aa8.81□□□□□ -1
PDLIM1-204ENST00000492511 ANGEL1Q9UNK9 670 aaKnown RBP8.81□□□□□ -1
PDLIM1-204ENST00000492511 MROH7-TTC4A0A0A0MT08 1334 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 WDHD1O75717 1129 aaPredicted RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 SLC34A2O95436 690 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 HSPA8P11142 646 aaKnown RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 NF2P35240 595 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 BTDP43251 543 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 KIF23Q02241 960 aaPredicted RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 NOGQ13253 232 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 SH3BP5LQ7L8J4 393 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 ARMC9Q7Z3E5 817 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 ADGRA1Q86SQ6 560 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 CLASRPQ8N2M8 674 aaKnown RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 FAM151AQ8WW52 585 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 CCDC102AQ96A19 550 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 CLMNQ96JQ2 1002 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 IDI2Q9BXS1 227 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 LRRCC1Q9C099 1032 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 DDX4Q9NQI0 724 aaKnown RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 RAI14Q9P0K7 980 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 LRP2BPQ9P2M1 347 aa8.8□□□□□ -1
PDLIM1-204ENST00000492511 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
PDLIM1-204ENST00000492511 PAPPA2Q9BXP8 1791 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 RFX7Q2KHR2 1363 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 PPP1R12BO60237 982 aaPredicted RBP8.79□□□□□ -1
PDLIM1-204ENST00000492511 IFIT2P09913 472 aaKnown RBP8.79□□□□□ -1
PDLIM1-204ENST00000492511 SLURP2P0DP57 97 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 TNNI2P48788 182 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 MLLT1Q03111 559 aaPredicted RBP8.79□□□□□ -1
PDLIM1-204ENST00000492511 TCP10Q12799 353 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.79□□□□□ -1
PDLIM1-204ENST00000492511 EXOC6Q8TAG9 804 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.79□□□□□ -1
PDLIM1-204ENST00000492511 CSRNP1Q96S65 589 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 BCL11AQ9H165 835 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 TMOD2Q9NZR1 351 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 THSD7BQ9C0I4 1608 aa8.79□□□□□ -1
PDLIM1-204ENST00000492511 CCDC85CA6NKD9 419 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 CA12O43570 354 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 ENTPD3O75355 529 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 LDHCP07864 332 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 ATP5JP18859 108 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 GJA5P36382 358 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 RGS3P49796 1198 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 PPP4CP60510 307 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 GSTO1P78417 241 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 NAA16Q6N069 864 aaPredicted RBP8.78□□□□□ -1
PDLIM1-204ENST00000492511 MIGA2Q7L4E1 593 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 SLF2Q8IX21 1173 aa8.78□□□□□ -1
PDLIM1-204ENST00000492511 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.78□□□□□ -11e-15■■■□□ 18.7
PDLIM1-204ENST00000492511 EDC3Q96F86 508 aaKnown RBP8.78□□□□□ -1
PDLIM1-204ENST00000492511 ECM29Q5VYK3 1845 aa8.77□□□□□ -1
PDLIM1-204ENST00000492511 ATRNL1Q5VV63 1379 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 RPAP1Q9BWH6 1393 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 DDTLA6NHG4 134 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 UNCXA6NJT0 531 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 IGSF3O75054 1194 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 IREB2P48200 963 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 DYNLL1P63167 89 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 MAP3K9P80192 1104 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 MAP3K10Q02779 954 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 MKRN3Q13064 507 aaKnown RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 SPRYD7Q5W111 196 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 ANKRD13AQ8IZ07 590 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 SH3RF3Q8TEJ3 882 aaPredicted RBP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 CNKSR2Q8WXI2 1034 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 SLC10A4Q96EP9 437 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 BOLA2Q9H3K6 86 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 AATFQ9NY61 560 aaKnown RBP eCLIP8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 PCDH10Q9P2E7 1040 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 TSKSQ9UJT2 592 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 ZNF112Q9UJU3 913 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 AKAP11Q9UKA4 1901 aa8.77□□□□□ -1.01
PDLIM1-204ENST00000492511 TCRBV5S4A2TA0A5A2 114 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms