RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 FAM47AQ5JRC9 791 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 BRF1Q92994 677 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 NEK1Q96PY6 1258 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 SLC12A7Q9Y666 1083 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CYP2D7A0A087X1C5 515 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 DDNO94850 711 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 MECOMQ03112 1051 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 KRT32Q14532 448 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 SAFBQ15424 915 aaKnown RBP eCLIP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 RABL6Q3YEC7 729 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 STYK1Q6J9G0 422 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 ZNF771Q7L3S4 317 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CCDC83Q8IWF9 413 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 FAM43AQ8N2R8 423 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 NCOA7Q8NI08 942 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CTCFLQ8NI51 663 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 KAT14Q9H8E8 782 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 GPBP1L1Q9HC44 474 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CNOT7Q9UIV1 285 aaKnown RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 ZNRF3Q9ULT6 936 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 ABT1Q9ULW3 272 aaKnown RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 TOPAZ1Q8N9V7 1692 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 PSMD14O00487 310 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 SEC24BO95487 1268 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 GSPT1P15170 499 aaKnown RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 SLC51AQ86UW1 340 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 MICALL2Q8IY33 904 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 ESR2Q92731 530 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 HAUS7Q99871 368 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 KCNQ5Q9NR82 932 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 PICK1Q9NRD5 415 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 GOLGA8BA8MQT2 603 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CYP2E1P05181 493 aaPredicted RBP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 RABEP1Q15276 862 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 TRIM22Q8IYM9 498 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 CSRNP1Q96S65 589 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 PLA2G12BQ9BX93 195 aa5.25□□□□□ -1.57
TRA2B-215ENST00000492417 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.25□□□□□ -1.57
TRA2B-215ENST00000492417 RGPD2P0DJD1 1756 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 CRKP46108 304 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 GMPSP49915 693 aaPredicted RBP5.24□□□□□ -1.57
TRA2B-215ENST00000492417 MTX1Q13505 466 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 TNFAIP1Q13829 316 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 WTAPQ15007 396 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 SLC10A5Q5PT55 438 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 PUS7LQ9H0K6 701 aaKnown RBP5.24□□□□□ -1.57
TRA2B-215ENST00000492417 CD2APQ9Y5K6 639 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 GOLGA8AA7E2F4 631 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 PPP1R12BO60237 982 aaPredicted RBP5.24□□□□□ -1.57
TRA2B-215ENST00000492417 GDF11O95390 407 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 LMNB1P20700 586 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 NFKBIBQ15653 356 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 IFIT1BQ5T764 474 aaKnown RBP5.24□□□□□ -1.57
TRA2B-215ENST00000492417 CATIPQ7Z7H3 387 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 FERMT3Q86UX7 667 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 LCORLQ8N3X6 602 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 NECAB1Q8N987 351 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 KLF18A0A0U1RQI7 1052 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 XBP1P17861 261 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 GNAT2P19087 354 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 SYAP1Q96A49 352 aaPredicted RBP5.24□□□□□ -1.57
TRA2B-215ENST00000492417 GPCPD1Q9NPB8 672 aa5.24□□□□□ -1.57
TRA2B-215ENST00000492417 PRC1O43663 620 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 RFX5P48382 616 aaPredicted RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CREB3L3Q68CJ9 461 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 KRT26Q7Z3Y9 468 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CREBRFQ8IUR6 639 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CPXCR1Q8N123 301 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 OSBP2Q969R2 916 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 DYNLL2Q96FJ2 89 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 MAP7D2Q96T17 732 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 MYL10Q9BUA6 226 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 GPR108Q9NPR9 543 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 HELLSQ9NRZ9 838 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CSADQ9Y600 493 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 MCM5P33992 734 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 TFAP4Q01664 338 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 PTH1RQ03431 593 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CXCL9Q07325 125 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 IFNL3Q8IZI9 196 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 SEC63Q9UGP8 760 aaKnown RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 ATP10DQ9P241 1426 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 PHRF1Q9P1Y6 1649 aaKnown RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 ALS2Q96Q42 1657 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 DDX11L8A8MPP1 907 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 IBSPP21815 317 aaPredicted RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 KIF4BQ2VIQ3 1234 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 Q6ZUG5 572 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 ZNF589Q86UQ0 364 aaPredicted RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 USP48Q86UV5 1035 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 SPICE1Q8N0Z3 855 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 SH3RF3Q8TEJ3 882 aaPredicted RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 BEGAINQ9BUH8 593 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 BRMS1Q9HCU9 246 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 CLIP2Q9UDT6 1046 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 ANGEL1Q9UNK9 670 aaKnown RBP5.23□□□□□ -1.57
TRA2B-215ENST00000492417 NHSL1Q5SYE7 1610 aa5.23□□□□□ -1.57
TRA2B-215ENST00000492417 M0R2C6 588 aa5.22□□□□□ -1.57
TRA2B-215ENST00000492417 SOCS7O14512 581 aa5.22□□□□□ -1.57
TRA2B-215ENST00000492417 SGSM2O43147 1006 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms